| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1810 |
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| Symbol | |
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| ID | 3966755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2302663 |
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| End bp | 2303349 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920893 |
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| Product | putative ATP-binding component of ABC transporter |
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| Protein accession | YP_527282 |
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| Protein GI | 90021455 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.512088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC CTGTAATTAA ATGCCTTAAT GTTGTTAAGG GTTATAGCGA AGGCCCGCAA
AAAGTAGAAG TGCTTCGCGG TGTAAATTTG CAAATCGAGC AGGGGCAGCA TATTGCCATT
GTTGGCGCCT CGGGTAGCGG TAAAAGTACC TTACTAAACG TGCTGGGCGG TTTAGATAAG
CCAGACGCTG GCGAAGTGTG GGTAAATGAA AAAGCCTTTT CTTCACTAAA CGATAATAAG
CGTGGCCTGG TGCGTAACCA AGAGCTGGGT TTTGTTTACC AATTTCATCA CTTGCTACCA
GAATTTACGG CGTTAGAAAA CGTGATGATG CCTTGCCTTA TTGCAGGGGT GAAAAAGGCA
CAGGCTAAAC AAAAAGCAGA GGCCTTATTA GATAAAGTAG GCTTATCACA TAGATTAGAT
CATAAGCCCG CTGAGTTATC GGGGGGGGAG CGACAACGGG TAGCTATCGC GCGAGCGTTG
GTAAATGAAC CCGCGTGTGT ACTAATGGAT GAACCAACCG GTAACTTAGA TACAGAAAAC
GCCGAATCTA TTCAAAGCTT AATGAAAGAG CTGAGTGCGC AACTGCAAAC AAGCTTTATA
GTGGTAACAC ACGATTTAGT GCTAGCCAAT ACTATGAACC AAGTATATCG GTTAGAAGCC
GGTGTACTAA ACAAGCAAGG CCAATAG
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| Protein sequence | MSTPVIKCLN VVKGYSEGPQ KVEVLRGVNL QIEQGQHIAI VGASGSGKST LLNVLGGLDK
PDAGEVWVNE KAFSSLNDNK RGLVRNQELG FVYQFHHLLP EFTALENVMM PCLIAGVKKA
QAKQKAEALL DKVGLSHRLD HKPAELSGGE RQRVAIARAL VNEPACVLMD EPTGNLDTEN
AESIQSLMKE LSAQLQTSFI VVTHDLVLAN TMNQVYRLEA GVLNKQGQ
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