| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1801 |
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| Symbol | |
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| ID | 3966746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2294476 |
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| End bp | 2295084 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920884 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_527273 |
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| Protein GI | 90021446 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE |
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| TIGRFAM ID | [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.170243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGCGT TATTAAGCAT TTTTGTAGAA TCTGTATTCG TTAAAAACAT GGCATTGGCC
TATTTCTTGG GCATGTGTAC GTTTCTTGCT ATTTCCAAGA AAATCGATGC AGCTATAGGT
TTGGGTATTG CCGTTGTTGT TGTACTCACT ATTACCGTTC CTGTTAACAA CTTGATGTTT
AACTACCTGT TGGCCGATGG CGCATTAGCC TGGGCTGGCT TGGAAGGTGT TGACTTAAGT
TTCTTAGGTT TGATTTGTTA CATTGGTGTA ATTGCTGCCA TCGTACAAAT TATGGAAATG
GTTTTAGATA AATACTTCCC AGCACTTTAC GGTGCATTGG GTGTGTTCTT ACCATTAATT
ACCGTTAACT GCGCAATTCT TGGTGCTGCA TTGTTAATGG TTCAGCGCGA ATATACCTTT
AGTGAAAGCG TAGTGTTTGG TGTTGGCTCC GGCGTTGGCT GGGCATTCGC CATTGTTGCG
TTGGCAGGTA TTCGTGAAAA ACTTAAGTAC AGTGATGTGC CAGAAGGTCT GCGTGGCTTA
GGCATTACTT TTATCACTGT AGGTTTAATG TCGTTAGGCT TTATGTCATT CGGCGGCATT
GCGCTGTAA
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| Protein sequence | MEALLSIFVE SVFVKNMALA YFLGMCTFLA ISKKIDAAIG LGIAVVVVLT ITVPVNNLMF
NYLLADGALA WAGLEGVDLS FLGLICYIGV IAAIVQIMEM VLDKYFPALY GALGVFLPLI
TVNCAILGAA LLMVQREYTF SESVVFGVGS GVGWAFAIVA LAGIREKLKY SDVPEGLRGL
GITFITVGLM SLGFMSFGGI AL
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