| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1776 |
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| Symbol | |
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| ID | 3966702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2266517 |
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| End bp | 2267767 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920859 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_527248 |
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| Protein GI | 90021421 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0108802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAACT TTCCAGGACA AGGATACATA GCAACAGGTT TTCATAACAA AAACAATGAG
ATAAATGCTG ATGCTAATGT AGAGTCACGG CGCCATATAC GCCTAGATGC GTTTGTAGAG
CGCAGTAACG GCAGTCGTTT AACAGTATCT GCCCAATATG AATCGTCTGT AACACGCGAT
AATTTCACGC GGGCAAGCGA GACCAGCAAT GTTTACGCTC AACCCAAAGT GCAATCTGTT
ACGAATAACA GCGGGCCAAC CTTGGCTGCG AGTAATATTT TAGGCTTTAT CGCTCAGCGA
TTAGGGCTTG ATGCAGCAGA GGGTGACGAT ACCGAAGCGT TACAGAGCAG GCTGCAAGCA
GGTTTAGATG GGTTTCTTAA GGGCTATGGC GAAGCAAGAG AGCAGCTATT GGCGCTCGGC
CAGTTAAATG GCGATGTGTT GGACGCGGTG GATAAAACCT TCAAAGATGT ATTAACAGGC
ATAGCTGATT TAGCGCAGGA ATATGGCTTG GAAAACCCTG CAGCCGACTT ACTTGCCGAG
ATAAAAACCA ATGAAGAAGA GCTGAATGTT GATGCCGTCG CGCAAACCGT CAACGCTTCT
AATCTTTCTC TAAGCGCTGA AATGCTGCAA GCCAGAACCT TTGAATTTGA AGTAAAAACA
GCAGAAGGCG ATATTGTATT AATCCGTGCG CTAGCGGAGC AAAGCGGCAG CTACAGCACC
AATGCAGATG GCAAATCAAT AAGTGCCAGT AGCAGCACGG TGAATCAGTT TAGCTTTTCT
GTAGAGGGCG AGCTAAACAG CGATGAAATA ACTGCGCTAA ATGACCTTTT AGGCAAAGTG
AGTGACTTGT CTGCTACGTT CTACAGTGGC AACTTAGAAG GCGCGTTTGA GCAAGCTTTA
AGCTTAGGTT ATGACGATGA GCAAATAGCG TCATTCTCGC TAAACCTTAC AATGTCTACC
TTTACGCGAG TGGATGACAG CTACGGCAAG GTCGCACGGC AAGGCGAGCG TCCACAACCA
CAAGAGCAAA GCGCGAATAA AGTAGAAATG ATGGATGCCA AGGTGGCTCG CATGGCAGCC
TTTATTCAGC AGCTAGAAAA AATACGCTTA GAGGGTGAAT CATTGGGGAT AGCTCATTCT
GCGCTGGGTT CGTTATTGGA TAAATCTGTT GGGCAAGAGC ATTCGGCTGT GCGCCAGCAT
GCGGAACGAT TTTTATCTGC GTTGCAAAAC ATAAACCCAG TTAAGGGCTA G
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| Protein sequence | MINFPGQGYI ATGFHNKNNE INADANVESR RHIRLDAFVE RSNGSRLTVS AQYESSVTRD
NFTRASETSN VYAQPKVQSV TNNSGPTLAA SNILGFIAQR LGLDAAEGDD TEALQSRLQA
GLDGFLKGYG EAREQLLALG QLNGDVLDAV DKTFKDVLTG IADLAQEYGL ENPAADLLAE
IKTNEEELNV DAVAQTVNAS NLSLSAEMLQ ARTFEFEVKT AEGDIVLIRA LAEQSGSYST
NADGKSISAS SSTVNQFSFS VEGELNSDEI TALNDLLGKV SDLSATFYSG NLEGAFEQAL
SLGYDDEQIA SFSLNLTMST FTRVDDSYGK VARQGERPQP QEQSANKVEM MDAKVARMAA
FIQQLEKIRL EGESLGIAHS ALGSLLDKSV GQEHSAVRQH AERFLSALQN INPVKG
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