| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1701 |
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| Symbol | |
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| ID | 3966488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2172015 |
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| End bp | 2172548 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920782 |
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| Product | hypothetical protein |
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| Protein accession | YP_527173 |
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| Protein GI | 90021346 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0167634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAGAA AAATCTTTAA GAGCTGGATT CCAGACCCCG TAAAGATTCG CAATAATCCT
GCGCTCAAGT TTCTTGGTGT ATTGTTGCAC GACCCCTACC TTTTCCATCT AAATCGCCAC
TCTGTAGCTG TCGCTTTTTT CGCTGGCTTG TTTATCACTT TTTTACCCAT TCCTGGCCAG
GTACCGCTGG CAGCGCTTGC AGCACTCGTA CTGCGCTGCA ATTTGCCCAT CACCATTGCG
TTAGTTTGGA TAAGTAACCC GCTTACCTTC CCCATTATTT TCTACGCGGC CTATAAGCTT
GGGGCGCGCC TATTAGACCA CCCCCCGCAA AAATTTCATT TTGAGCTTAC GTGGGAATGG
CTGCAAACCG ATTTTGCGCA CTATTGGCAA CCGCTGCTAT TGGGCTGCAT TATTGCCAGC
TTTTTCTTTA GCTGTTTAGG CTACGTAACC ATTAACTGGA TGTGGCGCTG GAATGTAAGC
AAACGCTGGA AAGAACGCGC CGAAAAACGC GCCCTTAACA AACCTCACAA ATAG
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| Protein sequence | MPRKIFKSWI PDPVKIRNNP ALKFLGVLLH DPYLFHLNRH SVAVAFFAGL FITFLPIPGQ
VPLAALAALV LRCNLPITIA LVWISNPLTF PIIFYAAYKL GARLLDHPPQ KFHFELTWEW
LQTDFAHYWQ PLLLGCIIAS FFFSCLGYVT INWMWRWNVS KRWKERAEKR ALNKPHK
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