| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1695 |
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| Symbol | |
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| ID | 3966482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2166432 |
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| End bp | 2167766 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920776 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_527167 |
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| Protein GI | 90021340 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.173001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGCC AAAACCTCTT CGATACTGCG CCGCTGCATC AGCCATTGGC TGCCCGTATG
CGGCCGCGTA CGCTAAAAGA ATATATGGGG CAAACCCATC TGCTAGGCAA GGGTAAACCT
TTGCGATTGG CTTTAGAGCG CGGCCAAATT CACTCTATGA TTTTATGGGG CCCACCAGGG
GTGGGTAAAA CCTCGCTCGC ACGTTTATTG GCCAATGAAA TACAAGGCCA CTTTATAGCC
ATATCGGCGG TGTTGTCTGG GGTAAAAGAA ATTCGCGCAG CGGTTGCCGA AGCCGAGCAA
CAGCGCAATA TGTACGGTCG CACCACGGTG TTGTTTGTGG ATGAGGTGCA CCGCTTTAAT
AAATCCCAGC AAGATGCTTT CTTACCTTAC GTTGAAGATG GCACCGTTGT ATTTGTTGGC
GCAACAACAG AAAACCCCTC GTTTGAGGTT AATAATGCAT TGCTTTCCCG CTGCAGGGTT
TATGTGCTTA AGGGATTTAC CCAACAAGAT TTAACCGAGC TTTTGCAAAG TGCACTCGCC
GATACCAAGC GCGGTTTGGG TGCGCGCGAG TTGAATGTGG CTGAAGATGG GGCGAATTTA
CTTATTCAGG CCGCTGATGG CGACGCTCGG CGCTTGCTCA ACCTATTGGA AATAGCCTCC
GATTTAGTCG AAGATGGCGA GTGTATCGAC CTAGATATAC TTACTCAGGT GGTAACTGGT
GATTTTCGCC GCTTTGATAA GGGCGGCGAT ATCTTTTACG AGCAGATATC CGCATTGCAT
AAGTCTGTGC GCGGGTCCGA CCCTCATGCA GCCCTGTATT GGTTTGCCCG AATGCTCGAT
GGCGGCTGCG ACCCGCTATA CATTGCCCGC AGGGTAGTGC GTATGGCGAG CGAAGATATA
GGCAATGCCG ACCCGCGTGG CCTGGCAATT GCAACCTCAG CGTGGGATGT GTTCACGCGA
TTGGGTAGCC CAGAGGGAGA ACTGGCTATA GCGCATGCAA TTGTTTACCT AGCTGCAGCA
CCTAAAAGTA ATGCTGTGTA TAATGCGTTC AACGCTGTAA TGGCAGATGT TAAAAGCTCG
CCTAGCCACC CAGTGCCCAA TCACTTGCGC AATGCACCAA CTGGCATGAT GAAAGATTTG
GGGTTCGGCG AAGGCTACAG GTACGCGCAT AGCGAAGAGG GCGGTTTTGC AGCTGGGGAA
AACTACTTTC CAGATGAGTT AGAGCCCCGA GCGTATTACC AGCCAGTTGA GCGCGGCTTA
GAAATTAAAA TTGCCGAAAA ACTACGTAAT TTGCGCAGTT TAAATGAGCA AGCCCGGCAC
GATAAATCAG ATTAA
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| Protein sequence | MSSQNLFDTA PLHQPLAARM RPRTLKEYMG QTHLLGKGKP LRLALERGQI HSMILWGPPG
VGKTSLARLL ANEIQGHFIA ISAVLSGVKE IRAAVAEAEQ QRNMYGRTTV LFVDEVHRFN
KSQQDAFLPY VEDGTVVFVG ATTENPSFEV NNALLSRCRV YVLKGFTQQD LTELLQSALA
DTKRGLGARE LNVAEDGANL LIQAADGDAR RLLNLLEIAS DLVEDGECID LDILTQVVTG
DFRRFDKGGD IFYEQISALH KSVRGSDPHA ALYWFARMLD GGCDPLYIAR RVVRMASEDI
GNADPRGLAI ATSAWDVFTR LGSPEGELAI AHAIVYLAAA PKSNAVYNAF NAVMADVKSS
PSHPVPNHLR NAPTGMMKDL GFGEGYRYAH SEEGGFAAGE NYFPDELEPR AYYQPVERGL
EIKIAEKLRN LRSLNEQARH DKSD
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