Gene Sde_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1679 
Symbol 
ID3965156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2146764 
End bp2147114 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID637920760 
ProductCBS 
Protein accessionYP_527151 
Protein GI90021324 
COG category[S] Function unknown 
COG ID[COG5626] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA AAGACCCATT TGCCCATTTA ACGCCACCAA ATGCTGATGA TGAAGATATT 
CATGTGACGC TTATGAAGCA AACTGCAATA ATTTCTTGGC GCGAACTACA ACGCTTTTTT
GCTGCAGGTA AAGTTATCGA GGTAGCGCGT GGAGTGGACC TTGTAAACGT TGGGCTAGCG
CTAGTGGAAG ATAACGCTGC GGCTATTAAA GAGTGGATGG ATAAAGAGCA AGTGCAGATT
ATTCCCGATA CTACCGCGGC ACAGTTTGTG GAAACCGACG CGAGTGTGTG GGCATTGGCT
GTGGCGCCTT GGGTGTTAGT GCAGCAGGTG GAACCAGCCC CCAAGCACTA A
 
Protein sequence
MTDKDPFAHL TPPNADDEDI HVTLMKQTAI ISWRELQRFF AAGKVIEVAR GVDLVNVGLA 
LVEDNAAAIK EWMDKEQVQI IPDTTAAQFV ETDASVWALA VAPWVLVQQV EPAPKH