Gene Sde_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1645 
Symbol 
ID3965161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2110371 
End bp2111477 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content52% 
IMG OID637920726 
Producthippurate hydrolase 
Protein accessionYP_527117 
Protein GI90021290 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACGCCA AACCGGAGCT AAGCTGGCAG GAACATAACA CTGCTAACGC GATTCGCGAA 
CAACTCGATG CTATGCATAT TGCATGGCGA GAGTGCGCGC AAACCTGCAC GCTCGCGTGG
ATAAATCCTA CCGGTACAGA ACCCGCCATT GCATTGCGCG GGGATATCGA TGCCCTGCCC
ATTCGCGAAG AAACAAATAA ACCTTGGCAG TCTAAAACCG AAAGATGTAT GCACGCTTGT
GGCCACGACG GCCACACCGC CACCCTACTC GCTACCGCTC GCTGGTTAAA AAAACATGAG
CATCAACTAG AACGAAAAGT CGTACTTATT TTTCAACCCG CCGAGGAAGG CGGCCATGGT
GCGCGCGAAA TGATAGCCGA TGGCGCCTTA GAAGGAGTTA GCGAAATATA CGGTTGGCAC
AATTGGCCAG CTTTCCCCTA CCGAACCATT GCCTGCCCAA ACGCCATTAT TATGTGCGGT
AACGGCACCT TCTCTATAAA AATTACCGGC AAAGGCGGTC ACGCCAGCCA ACCAGAACTA
TGCGTAGACC CCGTACTCGC GGCCAGTGCA ATCACGGTGG CGCTACAGCA AATATGTAGC
CATCGAATAG CACCTCAAAA AGCAGCGGTT ATTAGCGTAA CCGAAATTAA AGCCGGCGAC
GCACCTACCG TTATCCCAGA GTATGCGGAG TTAAAAGGAA GCATTCGTGT ACCCGACGAA
GAAACACGCC ATATCATTAA TCATGCAATT ACAGAGATTG CCACCCTCAC AGGTGCAAGC
TACGGCGTGC AATGCACGGT AGAGCACAGC ATGCGTTACA GCGCTACCAT CAATCACGCC
AAACAAGCCA ATCTTGCCAG GCGCCAATGG CAGGCATTGT ATGGTGAAAA GTCGCTGGTG
CCAGGAACAC TGCTCCCCGT AATGGCCTCG GAAGACTTCA GCTATTACCT TCGTGAATGC
CAAGGCGCAT TCGCGTTAAT TGGTAGCCGT GAAGGCAACC AAAACGCTGC CCCGTGTCAC
AGCCCGCATT ACGATTTTAA CGATAACCTC ATCGAAGATG TGTGCCGCTG GTTTTGTAGA
CTAACAGGTA TGCGGCTCCC CCCCTGA
 
Protein sequence
MHAKPELSWQ EHNTANAIRE QLDAMHIAWR ECAQTCTLAW INPTGTEPAI ALRGDIDALP 
IREETNKPWQ SKTERCMHAC GHDGHTATLL ATARWLKKHE HQLERKVVLI FQPAEEGGHG
AREMIADGAL EGVSEIYGWH NWPAFPYRTI ACPNAIIMCG NGTFSIKITG KGGHASQPEL
CVDPVLAASA ITVALQQICS HRIAPQKAAV ISVTEIKAGD APTVIPEYAE LKGSIRVPDE
ETRHIINHAI TEIATLTGAS YGVQCTVEHS MRYSATINHA KQANLARRQW QALYGEKSLV
PGTLLPVMAS EDFSYYLREC QGAFALIGSR EGNQNAAPCH SPHYDFNDNL IEDVCRWFCR
LTGMRLPP