| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1603 |
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| Symbol | |
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| ID | 3965670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2059034 |
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| End bp | 2060890 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920684 |
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| Product | putative beta-ketoacyl synthase |
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| Protein accession | YP_527077 |
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| Protein GI | 90021250 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00270338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC ATTCTAGTGT GTTACCTCTT ATTGTTGGTT TCGGTGGCTT TAATGCTGCC
GGTCGCAGTT CTGGTCATCA GGCATACTCG CGCATGGTGC TGGAGTCACT CGGCGTAAAT
GAGCGAAATC AAACTATTGC TGGGTTATCT GCATTAATGG GTTTGAAGGG GGCTGATGAA
GAGGCTGTGT TAAGCGGCAC ATTAGTAAGA CGCCTAGAAA CTAGGTTTTT TGACCCGGAA
GCGGCCCCGG GCGTTAAAAA ATTGGCACCA ATGGATGCAG TGAAAGGCGT AAATCAATAT
TTGGTGTCTG GTAAAGAATT ACCTAAGCCT TTACCCGCTG GTTGGACTGC AGAGCCATTG
GACGAAGGCG GCAAACAGTT TCGCGTAACA TTGCCTCAAG AGCAGGCAGT GTTTGTTGAG
CATAATACGC CAATGGCAGT GCAGGCAGCG GGCCAATTGC CAACAGGTTT TGAGCCTGGC
GATCACTACC GTTCACAGCA CCACCCTCGC GGTTTGCAAA TGTCTATTTT GGGCGCGTCA
GATGCCGTTA AATCCATGGG TTTGGCGTGG TCTGAAATCG TTCAGCTCGT TACACCAGAT
CAAATTGCTG TATACAGCAG CAGTGTGATG AGCCAGCTAG ATGCCACCGG TTTTGGCGGA
ATGATGCAAG CGCGTCAGCG CGGTGTGCGA CCCACATCCA AGCAGTTGGC CATGGGTTTG
AACACCATGC CAGCAGATTT TATTAATGCC TATGTGTTAG GTAGCTTGGG GGCAACGGCG
GGGATTGCTG GAGCTTGTGC AACATTCTTA TACAACTTGC GACAGGGAGT AGAAGATATT
CGCTCGGGGC GTCGCAAAGT TGTTATTGTG GGTAGTGCCG AAGCGCCGAT TGTGCCTGAA
GTAATGGATG GCTATGCCGC TATGAGTGCA TTGGCCACCG ATACCAACCT TATGAAATTA
GATGGCGTAG CAACGCCGGA TTACCGCAGA GCCAGTCGTC CATTTGGTGA TAACTGCGGT
TTCACTTTGG CTGAGTCCTC TCAGTATGTT GTGTTAATGG CAGACGATTT GGCACTCGAA
CTTGGTGCCC AAGTGTTTGG TGCTGTGCCT GGTGTATATG TAAATGCCGA TGGCTATAAA
AAATCTATTT CTGCACCTGG GGCGGGTAAC TATATAACCA TGGCTAAAGC TGTTGGTTTG
GCGCAAACCC TTGTGGGGGA GCAGGTAGTC AAGCATCAGT CGTTCGTGCA GGCACACGGC
TCTAGTACGC CGCAAAACCG AGTAACCGAG TCGCGAATAT TTGACCGCGT AGCGGAAGCT
TTTGGTATAG AGAGCTGGCC GGTTGCTGCG GTTAAATCCT ATGTTGGTCA CTCATTGGGG
CCGGCGAGTG GTGACCAGTT AGCTACAAGC TTAGGTATTT TCGCTAAAGG TATAGTGCCT
GGTGTAAAAA CTATAGCGAA AGTGGCTGAC GATGTATTCG CGCAGCGCTT GTCTATTGGT
TTAAACGACC AAAATGTGGG TGTAGAGAAT TGCAGCGTGG CTTTCTTAAA CTCTAAAGGT
TTTGGTGGTA ACAACGCCAC GGCAACGGTA TTTTCGCCAA GTATCGCGAA TGGTTATTTG
CTTAAAAAGT ACGGCACAGA GCGCTTTGCT ACATACTCAT CTGCGCAAGA GAAAACAACC
GCTGCGGCCC AATCTTATCT TGACGAAGCA GACAAAGGCG CGCTTAATCC TATCTATGAA
TTTGGCAACA ATATTGTAGA TGAGGAGAAA ATTCAGATTC AGCGCGATTC AATTCGCATT
CCTGGGTTTG AGTTTGAAAT TCCTCTGCTA AACGATGAGG GATACGGCGA GTTTTAG
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| Protein sequence | MTNHSSVLPL IVGFGGFNAA GRSSGHQAYS RMVLESLGVN ERNQTIAGLS ALMGLKGADE
EAVLSGTLVR RLETRFFDPE AAPGVKKLAP MDAVKGVNQY LVSGKELPKP LPAGWTAEPL
DEGGKQFRVT LPQEQAVFVE HNTPMAVQAA GQLPTGFEPG DHYRSQHHPR GLQMSILGAS
DAVKSMGLAW SEIVQLVTPD QIAVYSSSVM SQLDATGFGG MMQARQRGVR PTSKQLAMGL
NTMPADFINA YVLGSLGATA GIAGACATFL YNLRQGVEDI RSGRRKVVIV GSAEAPIVPE
VMDGYAAMSA LATDTNLMKL DGVATPDYRR ASRPFGDNCG FTLAESSQYV VLMADDLALE
LGAQVFGAVP GVYVNADGYK KSISAPGAGN YITMAKAVGL AQTLVGEQVV KHQSFVQAHG
SSTPQNRVTE SRIFDRVAEA FGIESWPVAA VKSYVGHSLG PASGDQLATS LGIFAKGIVP
GVKTIAKVAD DVFAQRLSIG LNDQNVGVEN CSVAFLNSKG FGGNNATATV FSPSIANGYL
LKKYGTERFA TYSSAQEKTT AAAQSYLDEA DKGALNPIYE FGNNIVDEEK IQIQRDSIRI
PGFEFEIPLL NDEGYGEF
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