Gene Sde_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1556 
Symbol 
ID3965084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2000631 
End bp2001182 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID637920634 
Producthypothetical protein 
Protein accessionYP_527030 
Protein GI90021203 
COG category[S] Function unknown 
COG ID[COG3310] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.996386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATT CAACGCAAGC AGTAGTAAAT AGCGTAAAGC AATGGCTAGC CAATGTGGTT 
ATTGGGTTAA ACCTTTGCCC CTTTGCGGGT AAGCCTACTG CAGAGGGTAA GGTGCGGTTT
AGCGTCAGCA GCGCTGTGGA TGAAGAGCAG CTAATAAACG AGCTAAAAGC AGAGCTAGAG
TTGTTGGACA CTAAGCCAGA AGTAGAAACT ACCTTGCTAA TACTGCCCAG CTACCTTGAT
GATTTTTATG AGTACAACAA CTTTTTAGAT TGGGTAGATG GCCTGCTGCA AAAATATAAA
TGGGAAGGCG TGTACCAAGT GGCGAGTTTC CACCCCAAAT ATTGTTTTGC TGGGGCGCAT
CCAGACGACG CGGAAAACCT GACTAACCGT TCGCCATACC CCTTATTGCA TCTTATTCGC
GAGGCCAGCC TAGAGGCTGT ACTGGCGCAT TACCCCAACC CAGACGAAAT ACCCGAGCGC
AATATTGACA CGGTAGAAGG CCTAAGCGCC GAGCAAACTC GCGCGCTGTT TCCCTATTTG
TTTAGCCGAT AA
 
Protein sequence
MEDSTQAVVN SVKQWLANVV IGLNLCPFAG KPTAEGKVRF SVSSAVDEEQ LINELKAELE 
LLDTKPEVET TLLILPSYLD DFYEYNNFLD WVDGLLQKYK WEGVYQVASF HPKYCFAGAH
PDDAENLTNR SPYPLLHLIR EASLEAVLAH YPNPDEIPER NIDTVEGLSA EQTRALFPYL
FSR