Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1556 |
Symbol | |
ID | 3965084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2000631 |
End bp | 2001182 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920634 |
Product | hypothetical protein |
Protein accession | YP_527030 |
Protein GI | 90021203 |
COG category | [S] Function unknown |
COG ID | [COG3310] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.996386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATT CAACGCAAGC AGTAGTAAAT AGCGTAAAGC AATGGCTAGC CAATGTGGTT ATTGGGTTAA ACCTTTGCCC CTTTGCGGGT AAGCCTACTG CAGAGGGTAA GGTGCGGTTT AGCGTCAGCA GCGCTGTGGA TGAAGAGCAG CTAATAAACG AGCTAAAAGC AGAGCTAGAG TTGTTGGACA CTAAGCCAGA AGTAGAAACT ACCTTGCTAA TACTGCCCAG CTACCTTGAT GATTTTTATG AGTACAACAA CTTTTTAGAT TGGGTAGATG GCCTGCTGCA AAAATATAAA TGGGAAGGCG TGTACCAAGT GGCGAGTTTC CACCCCAAAT ATTGTTTTGC TGGGGCGCAT CCAGACGACG CGGAAAACCT GACTAACCGT TCGCCATACC CCTTATTGCA TCTTATTCGC GAGGCCAGCC TAGAGGCTGT ACTGGCGCAT TACCCCAACC CAGACGAAAT ACCCGAGCGC AATATTGACA CGGTAGAAGG CCTAAGCGCC GAGCAAACTC GCGCGCTGTT TCCCTATTTG TTTAGCCGAT AA
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Protein sequence | MEDSTQAVVN SVKQWLANVV IGLNLCPFAG KPTAEGKVRF SVSSAVDEEQ LINELKAELE LLDTKPEVET TLLILPSYLD DFYEYNNFLD WVDGLLQKYK WEGVYQVASF HPKYCFAGAH PDDAENLTNR SPYPLLHLIR EASLEAVLAH YPNPDEIPER NIDTVEGLSA EQTRALFPYL FSR
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