Gene Sde_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1438 
SymbolengA 
ID3966116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1857099 
End bp1858514 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content47% 
IMG OID637920515 
ProductGTP-binding protein EngA 
Protein accessionYP_526912 
Protein GI90021085 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.432419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCAA CCTTGGCCTT AGTTGGCCGC CCCAATGTGG GCAAATCAAC CCTTTTTAAC 
CGTCTAACAC GTTCGCGCGA TGCGATTGTG GCTAACTTTT CCGGTCTTAC ACGCGATCGC
CAATACGGTG AAGCAACCCA TGGCGACAAA CGTTTTATCG TTGTCGATAC CGGCGGTATT
AGTGGTGAAG AGGAGGGGAT AGATTCCTAT ATGGCTGGCC AGTCGCTGCA AGCCATCGAA
GAAGCCGACA TGGTGGCATT TATAGTGGAT GCCCGCGTAG GCTTAACCGC GGCCGATATG
CAAATCGCTC AACACCTGCG TACCTGCAAT AAGCCTATTT TCTTGCTAGC CAACAAAGTT
GATGGTGTTA ACGAATCCAT TGTGTGCGCG CCATTTTTTG AGCTGGGTTT AGGCGATGTA
ATTGGTATTG CTGCGGCCCA TGGGCGCAAC ATAAACACCA TGCTCGACAC GGTATTAGAA
AACGTCGAGC CAGAAGCCGA GGCTTCAGAA GAGGATAAAG CCAAGGGTAT TAAGCTTGCA
ATTGTTGGTC GCCCCAATGT GGGTAAATCC ACCTTGGTGA ATCGCATGCT CGGCGAAGAT
CGTGTAGTGG TTTACGATAT GCCCGGCACT ACGCGAGATA GTATTTACAT CGAATATGAG
CGCGATGGAA AAGCTTATAC CATCATCGAC ACGGCGGGTG TTCGACGCAG AAAAAACATT
AAGTTAAGTG TAGAGAAATT CTCCATTGTA AAAACGCTAC AAGCGATTGA CGACGCCAAC
GTTGTTATTT TAGTGATGGA TGCGCAAGAG GGGATTGTAG ATCAAGACCT TCACCTAATG
GGGCACGTTA TCGATTCTGG CCGCGCGCTA GTGGTTGCGC TTAATAAATG GGATAACCTC
GATAACGACC ACAAAAGTTA TGTGAAAACT GAGCTTAGTC GTCGTTTGCA GTTTGTAGAC
TTCGCGGATT TACATTTTAT TTCTGCGTTG CACGGTACTG GAGTAGGTGA CCTGTACAAG
TCTGTTCACA AGGCTTATTC ATCAGCTACC GAAAAACTAA ATACAAATTT CTTAACTAAA
ATTTTGGAAT TTGCTGTTAG CCAACATCAA CCGCCGTTGG TTAATGGGCG TCGTATTAAG
TTGCGTTATG CCCATGCCGG TGGTCAAAAC CCGCCCATTA TTGTTATTCA CGGTAATCAA
ACGGCAGCTG TGCCTAAAAA CTATGTGCGT TACTTAGAAA AGATATTCCG TAAAGAGTTA
GAGCTACACG GCACGCCAAT TCGATTTGAA TTTAAATCTA GCGAAAACCC ATTTGCCGGG
CGCAAGAATG CAATGTCTAA AAAGCCAGAG CACCCTAGCC GCCGAGCAAA TAGCGGTGGC
AAGAGTATTA ATCGCAGGCC CAGACCTAAA AGCTAG
 
Protein sequence
MIPTLALVGR PNVGKSTLFN RLTRSRDAIV ANFSGLTRDR QYGEATHGDK RFIVVDTGGI 
SGEEEGIDSY MAGQSLQAIE EADMVAFIVD ARVGLTAADM QIAQHLRTCN KPIFLLANKV
DGVNESIVCA PFFELGLGDV IGIAAAHGRN INTMLDTVLE NVEPEAEASE EDKAKGIKLA
IVGRPNVGKS TLVNRMLGED RVVVYDMPGT TRDSIYIEYE RDGKAYTIID TAGVRRRKNI
KLSVEKFSIV KTLQAIDDAN VVILVMDAQE GIVDQDLHLM GHVIDSGRAL VVALNKWDNL
DNDHKSYVKT ELSRRLQFVD FADLHFISAL HGTGVGDLYK SVHKAYSSAT EKLNTNFLTK
ILEFAVSQHQ PPLVNGRRIK LRYAHAGGQN PPIIVIHGNQ TAAVPKNYVR YLEKIFRKEL
ELHGTPIRFE FKSSENPFAG RKNAMSKKPE HPSRRANSGG KSINRRPRPK S