Gene Sde_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1436 
Symbol 
ID3966114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1855165 
End bp1855881 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content47% 
IMG OID637920513 
Producthypothetical protein 
Protein accessionYP_526910 
Protein GI90021083 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.136443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGACC ACATTACAGA AGAAGAACAA ATCGAAGCAA TCAAGCGCTG GTGGAGTGAA 
AACTGGGCCT CTATTGTATT GCCCGTAGTG ATCTTAATTG TTGGCTATGC AGGTTGGTCA
TATTGGGGCG ATTATAAAGA AGCTCGAGCT CAAGAAGGCT CTGCAGCTTT TCAGGTTTTA
CTAGAAAAGG TAGAGGCCCA ACCAGGCCAA AAGTTATCTG CCGATGCTAT TACTGATGCA
CAGTTAGAAG CGCAATCTAT TGCTAGTGAG TTTAGCGGTA GTTTGTATGC TGATATGTCT
AACTTATTGC TTGCTCGCCT TGCTGTAGAG AGCGGTAAGT TAGATGAAGC GGAAGCTGCT
TTGAATGCGG TAATTGCAAG CCCTGCAAAC GAATCTGTTG TGGGCTTAGC AAAAGCGCGT
TTGGCCAAGG TTTATGCAGC GCAAGGTAAA TACGCTGAAG CATCTACCCT TGTGGGCAGT
ACCGAGCAAG AAGCCTATAA AGCACTTTAC GCCGAAATTC GCGGAGATAT TGCTTTGGCG
CAAGGTGATT TACCTACCGC GCACACTGCC TATAACGAAG CGCTTAACGG CTTAACTAGC
GCACAATACA GTCGTCGCGG TTTATTAGAT TTAAAAATAC AAGCAAGTAA AACGGAAGAT
GTTGCAGCCG CAGAAGCGGA AGCTGCCGAA GCAGTTGTTA GCCCGGAGGG GGTTTAA
 
Protein sequence
MSDHITEEEQ IEAIKRWWSE NWASIVLPVV ILIVGYAGWS YWGDYKEARA QEGSAAFQVL 
LEKVEAQPGQ KLSADAITDA QLEAQSIASE FSGSLYADMS NLLLARLAVE SGKLDEAEAA
LNAVIASPAN ESVVGLAKAR LAKVYAAQGK YAEASTLVGS TEQEAYKALY AEIRGDIALA
QGDLPTAHTA YNEALNGLTS AQYSRRGLLD LKIQASKTED VAAAEAEAAE AVVSPEGV