Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1436 |
Symbol | |
ID | 3966114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1855165 |
End bp | 1855881 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637920513 |
Product | hypothetical protein |
Protein accession | YP_526910 |
Protein GI | 90021083 |
COG category | [S] Function unknown |
COG ID | [COG2976] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.136443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGACC ACATTACAGA AGAAGAACAA ATCGAAGCAA TCAAGCGCTG GTGGAGTGAA AACTGGGCCT CTATTGTATT GCCCGTAGTG ATCTTAATTG TTGGCTATGC AGGTTGGTCA TATTGGGGCG ATTATAAAGA AGCTCGAGCT CAAGAAGGCT CTGCAGCTTT TCAGGTTTTA CTAGAAAAGG TAGAGGCCCA ACCAGGCCAA AAGTTATCTG CCGATGCTAT TACTGATGCA CAGTTAGAAG CGCAATCTAT TGCTAGTGAG TTTAGCGGTA GTTTGTATGC TGATATGTCT AACTTATTGC TTGCTCGCCT TGCTGTAGAG AGCGGTAAGT TAGATGAAGC GGAAGCTGCT TTGAATGCGG TAATTGCAAG CCCTGCAAAC GAATCTGTTG TGGGCTTAGC AAAAGCGCGT TTGGCCAAGG TTTATGCAGC GCAAGGTAAA TACGCTGAAG CATCTACCCT TGTGGGCAGT ACCGAGCAAG AAGCCTATAA AGCACTTTAC GCCGAAATTC GCGGAGATAT TGCTTTGGCG CAAGGTGATT TACCTACCGC GCACACTGCC TATAACGAAG CGCTTAACGG CTTAACTAGC GCACAATACA GTCGTCGCGG TTTATTAGAT TTAAAAATAC AAGCAAGTAA AACGGAAGAT GTTGCAGCCG CAGAAGCGGA AGCTGCCGAA GCAGTTGTTA GCCCGGAGGG GGTTTAA
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Protein sequence | MSDHITEEEQ IEAIKRWWSE NWASIVLPVV ILIVGYAGWS YWGDYKEARA QEGSAAFQVL LEKVEAQPGQ KLSADAITDA QLEAQSIASE FSGSLYADMS NLLLARLAVE SGKLDEAEAA LNAVIASPAN ESVVGLAKAR LAKVYAAQGK YAEASTLVGS TEQEAYKALY AEIRGDIALA QGDLPTAHTA YNEALNGLTS AQYSRRGLLD LKIQASKTED VAAAEAEAAE AVVSPEGV
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