| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1366 |
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| Symbol | |
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| ID | 3965846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1767018 |
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| End bp | 1768139 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920442 |
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| Product | putative putrescine transport ATP-binding protein |
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| Protein accession | YP_526840 |
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| Protein GI | 90021013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAGA ACCCGACAGC AATAGAAGAC GCTGGCGATG AGCCTATCGT ACAGCTACAA
AACCTCACCA AAACATTTGG CGCTAATTAC GCAGTAGATG ATATTAGCCT CACCATTTAC
AAGGGCGAAT TTTTCTCGTT GCTTGGCGCA TCCGGTTGCG GTAAATCGAC CCTACTGCGC
ATGCTCGCGG GTTTTGAACA ACCCACAAGT GGACAAATTT TTATCGACGG CCAAGAAATA
TCTAAAGTTC CGGCTTATAA ACGCCCTATT AATATGATGT TTCAAAACTA CGCACTGTTT
CCACATATGA ACGTAGCGGA CAACATTGGC TTTGGGCTAA AGCAAGAAGG CATGCCGCAA
AATTTGCGCA ATGAACGCAT CGCCGAAATG ATGAGCCTTG TGCAAATAGA AAAATTTGCA
AAGCGTAAAC CACACCAACT TAGTGGCGGG CAACGCCAGC GGGTTGCACT TGCGCGCGCA
CTGGCAAAAC ACCCTAAAAT TTTATTGTTA GATGAACCAT TGGGCGCACT AGACAAAAAA
TTGCGCGAAA AAACGCAATT TGAATTAATG AACATTCAAA ACCGGTTGGG CACAACATTT
ATCGTGGTAA CCCACGATCA AGAAGAAGCG ATGACTATGT CTTCGCGTAT AGCGCTTATG
CGCGAAGGTC GCATTGAACA AGTTGACGCC CCCCGCCGCA TGTACGAGTT CCCCACTACG
CGTTATGCAG CTGACTTTAT TGGGCTAATT AATTTATTTG AGGGCAAGGT CGTTACCCAA
ACAGGCGACG AAGTAACTAT TAGCTCAGAA ACCACCGGCG GCGATATAGT GGTGCACCAT
AGCCAACCAC TACTACCGGG CATGGATGTG TGCATTGCTT TGCGCCCAGA AAAACTGGTA
CTGCACGCGC AACACGAAAA TATTCCCAAC CGCATTGAAG GTGTTATTCG CGAAATTGCA
TACCTAGGCG ATGTATCTAT TTACCATGTA GAGCTTGCCT CTGGGTATAT CGCGCGTTTT
ACCCAATCGA ATATTTTAGC ACTAGCCGAG CAACCGTTAA CATGGGGGCA AACGGTAAGT
TTGGGCTGGC ACAACCACAG CTGCGGAGTA CTCACCCAGT GA
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| Protein sequence | MTKNPTAIED AGDEPIVQLQ NLTKTFGANY AVDDISLTIY KGEFFSLLGA SGCGKSTLLR
MLAGFEQPTS GQIFIDGQEI SKVPAYKRPI NMMFQNYALF PHMNVADNIG FGLKQEGMPQ
NLRNERIAEM MSLVQIEKFA KRKPHQLSGG QRQRVALARA LAKHPKILLL DEPLGALDKK
LREKTQFELM NIQNRLGTTF IVVTHDQEEA MTMSSRIALM REGRIEQVDA PRRMYEFPTT
RYAADFIGLI NLFEGKVVTQ TGDEVTISSE TTGGDIVVHH SQPLLPGMDV CIALRPEKLV
LHAQHENIPN RIEGVIREIA YLGDVSIYHV ELASGYIARF TQSNILALAE QPLTWGQTVS
LGWHNHSCGV LTQ
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