| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1342 |
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| Symbol | |
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| ID | 3965957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1736251 |
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| End bp | 1737174 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920418 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_526816 |
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| Protein GI | 90020989 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.577962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTCG AATTTTTTGG TCTGAATCGG ACCCCTTTTA AAATCACACC TGATACTCAC
CTTTTTTACG AAGGTAGTAA TCGAGGCGAC AATTTATTGG GCTTATGTTA CACCGTGGCG
CATGCCGAGG GCATTAGCAA GGTGGTAGGC GAAGTAGGTA CGGGTAAAAC TATGCTTAGC
CGCATGTTGC CATTAAAAGT TGAAGAGCAC ATAGATTGGG TATATTTGCC GCACCCTAAC
TTGTCGCCTA GTGAAGTGTT AGTCGCTATA GCGCGCGAGT TGGGTTTGGA GGTGGACGAT
GGTGCAGACA AGTCGCTGCT AACTACTCGG CTACACCAAG CCTTAATCTC CCGTCATGCC
AAAGGGCGTC GTGTGGTGGT GCTTATTGAT GAGGTACAGG CAATGAGTAT CGAAACCTTG
GAGGAAATTA GACTTTTAAG CAATCTAGAA ACGGATGAGC ACAAGCTATT ACAGATAGTA
ATGTTTGGGC AGCCAGAAAT AGATAAAAAA CTGGCTATGC CAGAAATTCG CCAATTGCGA
GAGCGAATAG TGCACCATTT CTACCTTTCC CCCTTTACCG AACGAGACGT TCAGGAGTAC
TTGAATTTCC GGATGCGAGC ATCTGGATAT AAGGGACCAG ATATTTTTAC GCAGGGTGTT
GCAAAAGCCA TTATGGCTTA TAGCCAAGGG CTAGTTCGGC GAGTAAATAT TATTGCCGAC
AAGACACTGC TAGCCGCATA CGTTAACAAT CGCTACGAGC TTAAAGTGGA AGACGTAAAA
GCAGCTGCGG TTGAGGGCCG TTTTAAAGCA GTACCTCTTT GGCAAAGAGT TAAATCGCTT
GTAAGTAAGC GAGATTATGC TTTGGTGGTG TTAATTGGAA TAGCGTCTGG CTCCACAGGA
TTAAACGTGG AGGGCTTGCT ATGA
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| Protein sequence | MYLEFFGLNR TPFKITPDTH LFYEGSNRGD NLLGLCYTVA HAEGISKVVG EVGTGKTMLS
RMLPLKVEEH IDWVYLPHPN LSPSEVLVAI ARELGLEVDD GADKSLLTTR LHQALISRHA
KGRRVVVLID EVQAMSIETL EEIRLLSNLE TDEHKLLQIV MFGQPEIDKK LAMPEIRQLR
ERIVHHFYLS PFTERDVQEY LNFRMRASGY KGPDIFTQGV AKAIMAYSQG LVRRVNIIAD
KTLLAAYVNN RYELKVEDVK AAAVEGRFKA VPLWQRVKSL VSKRDYALVV LIGIASGSTG
LNVEGLL
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