| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1309 |
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| Symbol | |
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| ID | 3966080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1701609 |
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| End bp | 1702238 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920385 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_526783 |
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| Protein GI | 90020956 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.106598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAAT CCAATGAACT TAAACTTGTT TTAGACACCC TAGGCAAGCG CAGAGCATGG
CTGCAAAAGA CCATTGAAGA CCCCAAGTTA GCCGAGGACG TCAAGCGCCC CCACATAGAA
ATGTTAAAAG TGATGGATTC TGCGCTGCAG AAGCTCGCTA GGTTAACGCC TAAAGCACCC
AGTGTCAGCG TAAGTTCGCA GCTTAAACGC ACCCAAATTA CAGCTAGTAA CGCGCGAATA
TTGGTGGCAG AAGATAATAG CGAAGCCTGT GAGCTAGTGG TTGGTATATT AACTGACGCT
GGCTTTAGGC TACTAGATAC TGCAGAAGAT GGCATTGCAG CCTTCGATAA GATAAAAAGC
GCAGCAGAAC CTTACGACGT TATTTTATGC GACTGGGATA TGCCAGAGTT GTCGGGGATA
GACATTCATA GCAAAGCGAA AGCCTCTAAT ACACTCCGCG GGGCGCACTT TGTAATGGTT
ACGGCAAATT CAGAGGCCTC ATCCATTCGC AAAGCCATAC AGCAAGGCAT AAACGACTAT
ATTGTTAAGC CTATAAATGC TGAGGTTCTA GTTAATAAAA TCAATGTGGC ACTAAATATT
GAAACCGCAC CCGCCCAAGC TCAAGGTTAA
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| Protein sequence | MLESNELKLV LDTLGKRRAW LQKTIEDPKL AEDVKRPHIE MLKVMDSALQ KLARLTPKAP
SVSVSSQLKR TQITASNARI LVAEDNSEAC ELVVGILTDA GFRLLDTAED GIAAFDKIKS
AAEPYDVILC DWDMPELSGI DIHSKAKASN TLRGAHFVMV TANSEASSIR KAIQQGINDY
IVKPINAEVL VNKINVALNI ETAPAQAQG
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