| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1258 |
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| Symbol | |
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| ID | 3965240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1610690 |
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| End bp | 1611457 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920332 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_526732 |
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| Protein GI | 90020905 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000210097 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCACAA CAAACAAATA CGCAGCACCG GCTTTAGAAA GGGGGTTGGA CATACTGGAA
TACCTTGTCA GCCAAGAGCA GCCCCGCTCC CAAACAGAGA TAGCAATAGG AATAGGCCGG
AAGCCAAATG ATATTTACCG AGTGTTGGTA GGGTTAGAAG CGCGGGGCTA CCTATTGCGC
GATGAACACT CTGGGCGCTA TCGGCTGTCG TTTAAGCTGT ACAACCTTTC GCGAAGTATT
TCCCCTATAG ACAAAATGCG CCAATGCGCC CTGCCCTACA TGGAAGACTT AGCAGTAGGC
ATTGGCCAAT CCTGCTACTT GGCTATGCTT TACCAGAGCC AAACTATGAT TATTGTGCAC
GCGCGCGGTC ACAGCCCAAT CTCGTTAAAC ATAAGCGAAG GCGCACTCTT TCCCACTAGC
GCAAGCACCG CTGGCAAGGT GTTGCTCGCC AACAGTAAAA CCAAAGTACG AAACATGATC
CTACAAAGAG ATAATACCTA TACAGCCCTC GCCAAGCCCA AGCAAACGGC TTTACTAGCA
GAGCTTGATA ACATCAAAGA TGACGGCTGC CTCTCTGCCG CCAGCCCCTT TATAGAGGGC
GCAACCGACT TTGCAGCCTT AATAGGCGTA CCAGAAGGCG AGGTAATAGC GGCTTTAGCA
ATTTCATCAC TCAAGTCTAA CTGGGGTAGC GCAACCCCAG CCGAAGAGCT ACGCGAGAAG
GTAATTGCTA CCGCCCAGCA CATTACCCAA CAGCTGGGTA GCCTGTAA
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| Protein sequence | MSTTNKYAAP ALERGLDILE YLVSQEQPRS QTEIAIGIGR KPNDIYRVLV GLEARGYLLR
DEHSGRYRLS FKLYNLSRSI SPIDKMRQCA LPYMEDLAVG IGQSCYLAML YQSQTMIIVH
ARGHSPISLN ISEGALFPTS ASTAGKVLLA NSKTKVRNMI LQRDNTYTAL AKPKQTALLA
ELDNIKDDGC LSAASPFIEG ATDFAALIGV PEGEVIAALA ISSLKSNWGS ATPAEELREK
VIATAQHITQ QLGSL
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