| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1234 |
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| Symbol | |
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| ID | 3968195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1582906 |
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| End bp | 1584180 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920308 |
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| Product | HD-GYP domain-containing protein |
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| Protein accession | YP_526708 |
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| Protein GI | 90020881 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATC AAGACGACCC CAATAACCCG AGCAAAAGAA TGCTCGGCTT GTCTGACATT
AAAACCCCCG TTAACGAATT GCACGTGGGT ATGTTTGTTA CCGCATTGGA TCGCGATTGG
TTAGAAACCC CCTTCTTAAC TCAAGGCTTT TATATAGAAA GCCCCGACGA TATTAAAAAA
ATTGCAGAAT ACTGTAAATA CGTTTGGGTG TTAGGGCGAC CCAAGCCATT ACACACTGGT
AAAGTGGATT TTGAATCTGG TGTGTTAATT GGCCGTAAGC CTACTAAGTA TGAAGTTGTT
CATAGTTCCA TAGAAGAACA CAAATTTGTC GATGGGTTTA TTCAAAAAGC TTCAGAATTT
ACCAAGGGAA TGTTAGATAA CCTACGTGCT GGCGGAGTGC TAGATACCCA AACGGCACGA
GGTGTCGTAT CTGATGTAGT GGCATCGGTT GTGCGTAGCC CCGATGCGTT AATGTGGATG
ACGCGCATGC GCGATGAAGA TGCCTACACT GCAGAGCACT CGTTAAATGT ATGTATTCTC
GCCACTGTAT TTGGCCGTAA GTTGGGGTTG CGTAAACCGC AATTGATAAA CCTTGGCTTG
TGTGGTTTTT TACACGATGT GGGTAAAACA AAAATACCCG AAGCCGTATT AAATAAGCCG
AGTAAACTCA CCGATAAAGA AATGAAAATG ATGCAGGCCC ATGCAACTCA CGGCCGCAAT
ATTTTGATGG AAAAGCGCGA CATGTATGAA GGCGCAATTG AGGTGGCTTA TTCCCATCAC
GAGCGCCCAG ACGGCAAAGG TTACCCGCGA GGGCTAAGCA GTGTTGATAC ATCGCTGTTT
ACTAAAATTA TTTCTATTGT AGATGCATAC GATGCCATGA CCGCCGATCG CGTGTACCAA
AAAGCGCGGC CATCGTCACA GGCACTTAAC ATTATTTACG AGGTGCGGGG GCAGCAGTTT
GACGAAAATC TTGCTCTGGC GTTTATTCAA ACAATAGGTT TGTACCCGCC AGGTAGCGTG
GTGGAGTTGG TGAATGGCTG TGTAGGGTTA GTGTTGGAAA CCAACTTAAA CTACCGCCAC
CTTCCACTTG TTTTATTAAT GCGCGACGAA AATAAAAAAG AGTGCAACCA CCGTTTAGTT
GACCTTGCTT TGACCGTGAC GGGTGAGCTT AGTCGTCAAT ATTTTATACG TTACATGCTG
CGCGATGGTA GTTGTGGCAT TAGTTTAAAA GCCTGCTTCG AGGCGGGTAT ACTCAACCAT
TTGGGCGACG CTTAG
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| Protein sequence | MIDQDDPNNP SKRMLGLSDI KTPVNELHVG MFVTALDRDW LETPFLTQGF YIESPDDIKK
IAEYCKYVWV LGRPKPLHTG KVDFESGVLI GRKPTKYEVV HSSIEEHKFV DGFIQKASEF
TKGMLDNLRA GGVLDTQTAR GVVSDVVASV VRSPDALMWM TRMRDEDAYT AEHSLNVCIL
ATVFGRKLGL RKPQLINLGL CGFLHDVGKT KIPEAVLNKP SKLTDKEMKM MQAHATHGRN
ILMEKRDMYE GAIEVAYSHH ERPDGKGYPR GLSSVDTSLF TKIISIVDAY DAMTADRVYQ
KARPSSQALN IIYEVRGQQF DENLALAFIQ TIGLYPPGSV VELVNGCVGL VLETNLNYRH
LPLVLLMRDE NKKECNHRLV DLALTVTGEL SRQYFIRYML RDGSCGISLK ACFEAGILNH
LGDA
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