| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1227 |
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| Symbol | |
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| ID | 3968012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1574288 |
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| End bp | 1575292 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920301 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_526701 |
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| Protein GI | 90020874 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0219402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGATG CCTATTGGTT ACCCGTTATT TTTGCAGGGC TCATGGCGCT GTCTATTTTG
GTTTACGCTA TGCTCGATGG CTACGATTTG GGCGTGGGCA TTTTAATGCC ATTACATAAA
GATGAAGAAC CCACTCGCGA CATTATGATC GCCAGCATAG GCCCCTTTTG GGATGCCAAT
GAAACTTGGC TAGTATTGGC GGTTGGCTTG TTACTTATTG CCTTTCCCAG CGCTTACAAC
CAGCTATTCT ACTACCTCTA CATTCCAACC ATTGTTATGT TAATCGGCCT TGTTTTACGA
GGTGTGGCGT TTGATTTTAG AGCCAAAGCT GCAGTGAGTT ACAAACTTAT TTGGGACTAT
TGTTTTAGAG CCGGCTCGCT ACTTACTTCG CTCGCGCAGG GCTATATGCT GGGCATGTAT
GTAATGGGTT TTAATACAGA CCCAAGCAGC ATTATGTTTT GCCTGCTAAG TGCACTCGGT
GTAACAGCCG CATATTGCTA CATAGGTGCG GCATGGTTAA TTATTAAAAC CGAAGACCAG
CTTCAGCATC GCGCTGTTCG CTGGGCCATT TTATGTGGGC GCGTAACTTT TATTGGTGTG
GTTGCGGTTT GCATTGTGAA CCTGTGGGTT AACCCCGAGG TGTACAGCCG CTGGTTTACA
TTCCCACTAG TAATGTTTGT ACTGCTACTG CCTGCACTTT GCATGACCGC ATTTTTTGCC
AACGACTTTT TATTAAAAAA GCTACCGCTT ACTAACGATA GATTAAACTG GCTGCCCTTT
GTAATTACCG CAGTGATTTT TATGGGCTGT TTTTGCGGCT TGGCGTTTAG CTTTTACCCA
GAAATATTCC CGGGTAAATT AACTATTTGG CAAGCAGCGA GCGCACCAGA AAGCTTGCGC
TTTATTTTAG TTGGGGCACT TATCGTCATT CCGGTAATTT TGGCTTACAC ATTTTTCGCG
TACAAAGTTT TTCACGGTAA AGCGACTGCC CTTCGTTACC ACTAA
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| Protein sequence | MIDAYWLPVI FAGLMALSIL VYAMLDGYDL GVGILMPLHK DEEPTRDIMI ASIGPFWDAN
ETWLVLAVGL LLIAFPSAYN QLFYYLYIPT IVMLIGLVLR GVAFDFRAKA AVSYKLIWDY
CFRAGSLLTS LAQGYMLGMY VMGFNTDPSS IMFCLLSALG VTAAYCYIGA AWLIIKTEDQ
LQHRAVRWAI LCGRVTFIGV VAVCIVNLWV NPEVYSRWFT FPLVMFVLLL PALCMTAFFA
NDFLLKKLPL TNDRLNWLPF VITAVIFMGC FCGLAFSFYP EIFPGKLTIW QAASAPESLR
FILVGALIVI PVILAYTFFA YKVFHGKATA LRYH
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