| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1221 |
|---|
| Symbol | |
|---|
| ID | 3968006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1568637 |
|---|
| End bp | 1569044 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637920295 |
|---|
| Product | phosphoglucomutase, alpha-D-glucose phosphate-specific |
|---|
| Protein accession | YP_526695 |
|---|
| Protein GI | 90020868 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
|---|
| TIGRFAM ID | [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00113988 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATG TAAAAACCAG CCAAAGCTAT CAAGAGCCGC AATCTACCGA ATCTAGCCTG
GTGCAGTCTG ATACCGCAGG TAGGCACTTT ATTGTGGATT TCTGGGGTGC GCACTATTTA
GAAAATGTCG ATGTGCTCGA GCAGGCGCTT ACCGACGCAG CCAGTGTGGC GGGAGCTGTG
TTGTTGCATA TTCATCTACA CAAGTTTACG CAAGGTGGCG GTGTAACTGG CGTGGCGCTG
TTGGCCGAAT CACACATAAG TGTGCACACT TGGCCAGAGA GAGATTACGC CGCTTTTGAT
GTGTTTATGT GCGGCGATGC CAAGCCACAA GATGCTGTAG CATTGTTAGA GCGTGTATTT
AAGCCTACAA AAACCAAGAT ATCTGAAATA CTGCGCGGTA AAGAGTAA
|
|---|
| Protein sequence | MIDVKTSQSY QEPQSTESSL VQSDTAGRHF IVDFWGAHYL ENVDVLEQAL TDAASVAGAV
LLHIHLHKFT QGGGVTGVAL LAESHISVHT WPERDYAAFD VFMCGDAKPQ DAVALLERVF
KPTKTKISEI LRGKE
|
|---|
| |