| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1209 |
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| Symbol | |
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| ID | 3967878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1552608 |
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| End bp | 1553960 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920283 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_526683 |
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| Protein GI | 90020856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0141244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATT GTTGGCGCTT TGTTTACCCA TTAGAGGAAC GTAGCTTGAA ACCTGTGAAT
ATTGGCCTGT GTGGTCTTGG CACTGTTGGC GGCGGTACAC TTACTGTACT TAAGCGCAAT
TTGCTCGATA TTAATGCCCA TGCGGGTAAA AGTGTGGTGC TAACCCATAT TGGTGCCCGC
CGTGATAACC CTGCATTCGA CCTTAGCGGT ATTAAAGTAA GTCGCGATGT GTTCGCAGTG
GCTGACGATC CAGAAGTTGA TATTTTGGTT GAGCTAATTG GTGGAACCTC CGTCGCCAAA
GAGTTGGTTT TGCGTGCAGT GCGCAGTGGC AAGCACGTGG TGACTGCAAA CAAGGCGCTT
ATTGCCGAGT TTGGTAACGA GCTATTTGCT GAGGCCGCCA AACACAACGT AGTAATAGCC
TATGAAGCGG CGGTTGCGGG CGGTATTCCT ATCATTCGCG CCATGCGCGA AGGTTTAGCA
GCCAATAAAA TTGAATGGTT GGCTGGTATT ATTAACGGTA CCGGTAACTT TATTCTTACC
GAAATGCGCG ATAAAGGTCG TGCATTCGAA GATGTATTAA AAGAAGCGCA AGAGCTAGGT
TACGCCGAGG CTGACCCTAC GTTCGACGTA GAGGGCATTG ATGCCGCGCA CAAGCTTGTT
ATTCTTGCGT CTATTGCGTT TGGTATGCCT TTGCAGTTCG ACAAGGTATT TACCGAGGGC
ATTAGTACAA TTTCTACCGA AGATGTGGCG TACGCCGGTG AGCTTGGCTA CCAAGTGAAG
CACTTAGGTA TAACACGCAA GCGCCCCAAT CAGGGTATTG AATTGCGCGT GCACCCCACG
CTAATTCCTA ACTCACGTCT AATTGCCAAC GTAGATGGTG TTATGAATGC GGTGTTAGTT
AAGGGTGATG CTGTAGGCCC TACCTTGTAC TACGGGCCTG GTGCTGGCGC CGAGCCAACT
GCGTCTGCGG TTGTCTCTGA TATTGTTGAT GTAAGCCGAT TAGTGGGTGC CGAATCTGGC
TCAAGTGTAC CGCACTTAGG GTTTGCGCTA GATAAACTAG TCGATTACCC AATCCTGCCA
ATTGAAGAAG TTGAGACCGC TTACTATATT CGTATTTCAG CGTTAGATCG CCCTGGTGTG
CTCTCTAAAA TCACCCAGAT ATTGAGCGAT GCTGGCATTA GTATTGAAGC GTTAATACAA
AAAGAGCCGA AAGAAGGGCA AGATCATGTG CCGGTTATAT TGCTAACTAA CCGCGCCATA
GAAAAACAAA TTATTGCAGC CATTAAGAAG ATTGAAGCGT TAGATTCTAT AAATGGCAAA
GTTGTGCGTA TTCGTGTTGA GTCGCTTAAA TAA
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| Protein sequence | MADCWRFVYP LEERSLKPVN IGLCGLGTVG GGTLTVLKRN LLDINAHAGK SVVLTHIGAR
RDNPAFDLSG IKVSRDVFAV ADDPEVDILV ELIGGTSVAK ELVLRAVRSG KHVVTANKAL
IAEFGNELFA EAAKHNVVIA YEAAVAGGIP IIRAMREGLA ANKIEWLAGI INGTGNFILT
EMRDKGRAFE DVLKEAQELG YAEADPTFDV EGIDAAHKLV ILASIAFGMP LQFDKVFTEG
ISTISTEDVA YAGELGYQVK HLGITRKRPN QGIELRVHPT LIPNSRLIAN VDGVMNAVLV
KGDAVGPTLY YGPGAGAEPT ASAVVSDIVD VSRLVGAESG SSVPHLGFAL DKLVDYPILP
IEEVETAYYI RISALDRPGV LSKITQILSD AGISIEALIQ KEPKEGQDHV PVILLTNRAI
EKQIIAAIKK IEALDSINGK VVRIRVESLK
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