| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1194 |
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| Symbol | |
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| ID | 3967863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1539499 |
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| End bp | 1540929 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920268 |
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| Product | cytochrome bd ubiquinol oxidase, subunit II |
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| Protein accession | YP_526668 |
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| Protein GI | 90020841 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.679676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTAG CTAGCTTCAT TGCATTTCTT TTAATGTTTG CCTGTATAGG GCTAGCTTCT
GCGCGTGTGA GTAAAGGTTC GGTAGGGGAT TATTATTTGG CGAGCCGCTC CGTTAAGGCA
TGGCTAGTGG GTTTGTCTGC CGTGGCAACC AATAACAGCG GTTATATGTT TATTGGCGTT
ATCGGCTACA CCTATGTCGA GGGGCTGGCT TCGGTATGGT TGATGACTGG CTGGTTAGTG
GGTGATTTTG TTGGCTCTAC GTTTGCGCAT AATCGCTTGC GCGGTGCAGC TAAAGCAAAT
GGCGATGTGA GTTATATTTC TGTACTAAAC AATTGGAATG GTCAGGGCGC ACCGTATTTG
CAACGGTTAA TGGGCCTATT GGCGCTAACA TTCTTGTTGG CGTACGCGAG CGCGCAGCTT
GTGGCGGGTA GTAAGGCGCT GTTCGTGCTA TTGGATTGGC CAACCTATCT GGGTGCTACT
GTTGGTGCGG TAATCATTAT GGGCTACTGC CTTGCAGGTG GAATACGCGC TTCTATTTGG
ACCGATGCTG CGCAGTCTTT TGTAATGATT CTGGCTATGT CGATCTTGTT AGTCGTTGCT
GTTGCAAGCG TAGGCGGCGT CGGGGATGCA ATTGCCAAGA TGGATGCGAT ACCTTACTAC
CTTTCGGTTA TGCCGCAGGA TTTGGCTGTG CCAGGGTGGG GCGGCTTGGG TTTATTTGTG
CTGGGTTGGT TTGTTGCAGG CCTGTCGGTA ATTGGGCAGC CGCATATTAT GGTTCGCTTT
ATGGCGCTAG AGGATACTCG TCGCTATAAC GTTGCTCGCT GCTGGTATTA TTCTTGGTTC
ACTATTTTTT ATTGCATGGC AACTGCGGTA GGTATGCTTG CTCGTATTTT GTTACCCGAT
GTCGATGCGT TTGATGCGGA GCTTGCACTG CCAACGCTCG CGTTAAAAAT GCTGCCTACG
GTTTTGGTCG GCCTGATCTT GGCTGGTATC TTTGCTGCGA CAATGTCGAC AGCCGACTCT
TTGGTGCTAA GTTGTTCCAG TACTTTAAGT CACGATATTT TCCCCGCTTC AGACAAGTTC
ACGCCAAAAC AAAAGCTTAT TATCGCGAAG TTGGCAACGG TGACCATTGC TGTTGCTGCA
CTCGTGTGGG CATTAACGAA TAAGCAGTCT GTATTTGGCT TGGTGCTTAT GGCATGGTCT
ACGCTAGGCT CTGCGTTTGC ACCCTTATTA ATTGTGTTAG CGTTTGGTGC AAAACCGCTT
GCATCTACCC GTGCTGCGAT GATCGCCAGT GGTGTTGCGG CATGCCTGCT ATGGCGTTAT
TTTGGTTTGC AAGGGGCTAT ATTTGAAGGT GTGGCGGGTA TTTCTGCGGC GCTAATTATA
TTTTTAGTTC ATACCTATAT TATTCGGCGC GCAGCCGCTA AAGCTGCTTG A
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| Protein sequence | MLLASFIAFL LMFACIGLAS ARVSKGSVGD YYLASRSVKA WLVGLSAVAT NNSGYMFIGV
IGYTYVEGLA SVWLMTGWLV GDFVGSTFAH NRLRGAAKAN GDVSYISVLN NWNGQGAPYL
QRLMGLLALT FLLAYASAQL VAGSKALFVL LDWPTYLGAT VGAVIIMGYC LAGGIRASIW
TDAAQSFVMI LAMSILLVVA VASVGGVGDA IAKMDAIPYY LSVMPQDLAV PGWGGLGLFV
LGWFVAGLSV IGQPHIMVRF MALEDTRRYN VARCWYYSWF TIFYCMATAV GMLARILLPD
VDAFDAELAL PTLALKMLPT VLVGLILAGI FAATMSTADS LVLSCSSTLS HDIFPASDKF
TPKQKLIIAK LATVTIAVAA LVWALTNKQS VFGLVLMAWS TLGSAFAPLL IVLAFGAKPL
ASTRAAMIAS GVAACLLWRY FGLQGAIFEG VAGISAALII FLVHTYIIRR AAAKAA
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