Gene Sde_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1168 
Symbol 
ID3968431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1503242 
End bp1504033 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID637920239 
Producthypothetical protein 
Protein accessionYP_526642 
Protein GI90020815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000323941 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000154553 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATCCA TTCAAGTCAT TAGCACAATT ATCGTCCTTC TTGCAGGGCT GGTATGCTAT 
GCCTTCATTT CGCAAACGCT GCGCATAAAG AAAGAGCAGC GCGAAAGGCT TATGGCCATG
CTAAAACGCA GAAACAATAC TTTTAAGTTT ATGCTGAATG GGTTCCCCAA GGGTTTCTTG
CCAAAAGAGC TAACTTTGCT CGTACAACGC AGTTTAATAG AAACCTGCGA GCAGCTAACT
AAACTCGACA GCAGTAACCC CACCTATCAG CAAGACTTAC AAATTGTGTC TGGTCAAATG
ACCGAGACTC AGCGCCAATC TGGGCCGCAA CCGCAAAAGC GGCTGGATAA CCAGCAGCAA
GTAAAAGAAG TAAAAATGTG CCTAGAAGAG CTGTATAGGT TTATACACAA CCAGCAGCAA
AAGAATCTGC TTCCTAAAAA CCAAGCCGAT GCCTTTAGTG CCCAAATCAA ACAACTGGTA
TTGCAAATTA CCGTGGACTC TTATGTTTTG AGAGGTGTCG CTTCACAACA AAGTGAGAAG
TACAAACTGG CTTACCACTA CTACGACCTA GCTATAAAGC TGTTGGTACG AGAGGGTAAG
GCGGGTGCCC ACGACGAGCG TATCGCCGAG CTTAAAGCCC TTCTCCCCCC TCTTGCGGTT
AAGATGGCTG AAGAAGAAGG AACCACGAAC CTATCTGAAC AAGAGATGGC AGAACAAACC
GAGATGGACA GCGAGTGGGA TAAATTTGGC GAAAAAGAAG ACTTCTGGAA GAAGAAGCAC
GCTTACGACT AA
 
Protein sequence
MSSIQVISTI IVLLAGLVCY AFISQTLRIK KEQRERLMAM LKRRNNTFKF MLNGFPKGFL 
PKELTLLVQR SLIETCEQLT KLDSSNPTYQ QDLQIVSGQM TETQRQSGPQ PQKRLDNQQQ
VKEVKMCLEE LYRFIHNQQQ KNLLPKNQAD AFSAQIKQLV LQITVDSYVL RGVASQQSEK
YKLAYHYYDL AIKLLVREGK AGAHDERIAE LKALLPPLAV KMAEEEGTTN LSEQEMAEQT
EMDSEWDKFG EKEDFWKKKH AYD