Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1168 |
Symbol | |
ID | 3968431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1503242 |
End bp | 1504033 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920239 |
Product | hypothetical protein |
Protein accession | YP_526642 |
Protein GI | 90020815 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000323941 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000154553 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCATCCA TTCAAGTCAT TAGCACAATT ATCGTCCTTC TTGCAGGGCT GGTATGCTAT GCCTTCATTT CGCAAACGCT GCGCATAAAG AAAGAGCAGC GCGAAAGGCT TATGGCCATG CTAAAACGCA GAAACAATAC TTTTAAGTTT ATGCTGAATG GGTTCCCCAA GGGTTTCTTG CCAAAAGAGC TAACTTTGCT CGTACAACGC AGTTTAATAG AAACCTGCGA GCAGCTAACT AAACTCGACA GCAGTAACCC CACCTATCAG CAAGACTTAC AAATTGTGTC TGGTCAAATG ACCGAGACTC AGCGCCAATC TGGGCCGCAA CCGCAAAAGC GGCTGGATAA CCAGCAGCAA GTAAAAGAAG TAAAAATGTG CCTAGAAGAG CTGTATAGGT TTATACACAA CCAGCAGCAA AAGAATCTGC TTCCTAAAAA CCAAGCCGAT GCCTTTAGTG CCCAAATCAA ACAACTGGTA TTGCAAATTA CCGTGGACTC TTATGTTTTG AGAGGTGTCG CTTCACAACA AAGTGAGAAG TACAAACTGG CTTACCACTA CTACGACCTA GCTATAAAGC TGTTGGTACG AGAGGGTAAG GCGGGTGCCC ACGACGAGCG TATCGCCGAG CTTAAAGCCC TTCTCCCCCC TCTTGCGGTT AAGATGGCTG AAGAAGAAGG AACCACGAAC CTATCTGAAC AAGAGATGGC AGAACAAACC GAGATGGACA GCGAGTGGGA TAAATTTGGC GAAAAAGAAG ACTTCTGGAA GAAGAAGCAC GCTTACGACT AA
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Protein sequence | MSSIQVISTI IVLLAGLVCY AFISQTLRIK KEQRERLMAM LKRRNNTFKF MLNGFPKGFL PKELTLLVQR SLIETCEQLT KLDSSNPTYQ QDLQIVSGQM TETQRQSGPQ PQKRLDNQQQ VKEVKMCLEE LYRFIHNQQQ KNLLPKNQAD AFSAQIKQLV LQITVDSYVL RGVASQQSEK YKLAYHYYDL AIKLLVREGK AGAHDERIAE LKALLPPLAV KMAEEEGTTN LSEQEMAEQT EMDSEWDKFG EKEDFWKKKH AYD
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