Gene Sde_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1154 
Symbol 
ID3968398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1490723 
End bp1491004 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content44% 
IMG OID637920225 
Producthypothetical protein 
Protein accessionYP_526628 
Protein GI90020801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.103773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAGG TATTAATTGA ACGCCATATA GCCGATGGAA TGCTATCTAC TTACGAAGAT 
AGTTCGCGTC ACGCACTGCA AAAAACCTAC GCGGTGCCAG GCTTTATTTC TGCAGAAGCC
TTTACCGATG TGCACGATCC AAACCACAAG TTTGTTTTAA GTAAATGGCG CACGGCGCAA
GACTGGCACC GCTGGGCACA AAGCGAAGAG CGTCTGGAGT TAATTAACCT TATTTCCCCT
GTTTTAACTC AGCCAGAAAA AGTAACGTTA ATAGAAAACT AG
 
Protein sequence
MIQVLIERHI ADGMLSTYED SSRHALQKTY AVPGFISAEA FTDVHDPNHK FVLSKWRTAQ 
DWHRWAQSEE RLELINLISP VLTQPEKVTL IEN