Gene Sde_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1131 
Symbol 
ID3968318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1467289 
End bp1468230 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content51% 
IMG OID637920202 
Producthypothetical protein 
Protein accessionYP_526605 
Protein GI90020778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATTTT TTAAGTCTCG CTTAGCTGGT AAGGCCGTTG TGGGTATAGA GCTTTCTCGT 
GCGGGTATTG CGGTGGTTGT GCTGGGGCGA GAGGCGGGTG GCAAGGTTAT TCAGGCGAGT
ACGTTAATAG CTGCTCAGGG GCAAAACAGC AGTATTGCTA GTTTTCAATC CGACCTTAGT
GAGCTGGTAG AAAAGCACCA ACTAAAAGCG GCCAAGTGCA ATTTGGTATT GGCCAAAGAG
GATTACCAGC TATTACTTGT AGAAGCGCCA GATGTACCCG ATGCAGAAAT TAAAGAAGCA
ATTCGCTGGC GTGTGAAAGA TTTAATTAGT ACGCCGGTAG AGCAAGCCGC GCTCGATGTT
TTTTTACTGC CCGACGACGG CGCGCGCGGG GGTAAGAAAA TGGTTTATGT GGTGGTGGCA
GATAAAGCGC GAATTAAAGA AATTGTCGAT TTTGTTGCAC ATAGCCAGCT GAGCCTCAAC
TCAATTGATA TTGTCGAATT GGCCATGCGT AACATCACAC TAGCCCTGCC CGATGAGGCT
GCTCAAGTAA GGGGAATCGC CCTTGTGCGT ATCGGTGAGG GGGTTGGCTC CGTATCTGTA
TATCGGCAGG GCAATTTGTA CCTTTCCCGT CAGTTTCAAA TTCAATATAG CGGCGGGTTG
CTAGACGACC TGCCGGTAGA TAGTTTGGCC CTAGAAGTGC AGCGCTCGCT GGATTATTAC
GAGCGACAAA TGGGGCAGGC ACAACCCGCA GCCCTGTATG TATGTGGCGA AAACATTAGC
GAAGATAAGG TGAACGAAGA GCTAAAACGA GCGTTGCCCC TAACGGTTAA CTGGCTGGAT
GTGAGCGCCT TGGTGCCCAG TGCCGAAGAA GAGCCCGATG AAGGCATAGC GCAATTGTGC
GTGGGAGCAC TAGGTGCGTG TATGCGGGAG GCCAGTGCTT AA
 
Protein sequence
MQFFKSRLAG KAVVGIELSR AGIAVVVLGR EAGGKVIQAS TLIAAQGQNS SIASFQSDLS 
ELVEKHQLKA AKCNLVLAKE DYQLLLVEAP DVPDAEIKEA IRWRVKDLIS TPVEQAALDV
FLLPDDGARG GKKMVYVVVA DKARIKEIVD FVAHSQLSLN SIDIVELAMR NITLALPDEA
AQVRGIALVR IGEGVGSVSV YRQGNLYLSR QFQIQYSGGL LDDLPVDSLA LEVQRSLDYY
ERQMGQAQPA ALYVCGENIS EDKVNEELKR ALPLTVNWLD VSALVPSAEE EPDEGIAQLC
VGALGACMRE ASA