| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1114 |
|---|
| Symbol | |
|---|
| ID | 3968301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1442018 |
|---|
| End bp | 1442647 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637920185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526588 |
|---|
| Protein GI | 90020761 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT TAAGAGCCGG TTTTGCGGCT GTATTAATCG TATTGTTAGC AGGGTGCGCT
TCTAGCGTGC GCACCAAAAT TAGCACCTTT CACGACTCGA GTGTAGCGGT TGGGGCGGGC
ACTATTCGCG TAGAGCCTCT AAACGATAGC CTTAAAGGCT CACTAGAGTT TGGCTATTAC
AAAGAGCGCT TAGAGGAAAA GCTAAAGCAG GCTGGATACA GCGTACAAAC AGGTAATACC
CAATATGTAG CGCGCTTGGA TTACAACGTA TCGCGCAGAG AAGCCGAGCA ATCACCTTCT
AGTCAAATCG TGGTGGCAAC GGGTGTGGGC TTTCATCGAC GCTACTCCCG CACAGGCTTG
TACTTCTCGG ATAACTTCGA AAAACGTTTC GAGTTTGAGC GCCTACTGGT GTTAGTTATT
GCCGATGCAG GCAAGCTGGC TGCGGCGAAA GCCAACCCAG ACGCAGTGGA TGAAACCATC
AACGTGCTTG AGATTACCGC CCGCAGCGTG GGTAATTGCG AGAGCCTACC TATTGTTTAC
GAGGAAATGT TAGAAGCCAT ATTTAAGGAC CTCAAGCGCC CCAACGGCTC TATGCAAACT
GTCAAAGTTA AGGGCGATTC GCGCTGCTAA
|
|---|
| Protein sequence | MTILRAGFAA VLIVLLAGCA SSVRTKISTF HDSSVAVGAG TIRVEPLNDS LKGSLEFGYY
KERLEEKLKQ AGYSVQTGNT QYVARLDYNV SRREAEQSPS SQIVVATGVG FHRRYSRTGL
YFSDNFEKRF EFERLLVLVI ADAGKLAAAK ANPDAVDETI NVLEITARSV GNCESLPIVY
EEMLEAIFKD LKRPNGSMQT VKVKGDSRC
|
|---|
| |