Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1086 |
Symbol | anmK |
ID | 3968250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1388225 |
End bp | 1389340 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637920154 |
Product | anhydro-N-acetylmuramic acid kinase |
Protein accession | YP_526560 |
Protein GI | 90020733 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0150902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.107543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCT CTTTGTTTGT AGGCGTTATG TCTGGCACGA GCGCAGATGG CATTGATGTC GCGCTCGTAG ATTTTAGCCA AGCTACACCT GCACTAGTAG GCAGCGAATC GCATGCCTAC CCCAACCACA TTCGCGAGCA CGTTTTAGGC TTGTGCACAC CCGCCAACAA CGAAATAGAC GCTCTCGGTC AGCTGGATGT AGAATTGGGC AAATTGTACG CCCACGCGGT GAACTCACTA CTGGCCAACA CCCAAACACC CGCAGCACAA ATCCAAGCCA TTGGTTGCCA CGGCCAAACC TTGCGCCACC GCCCGCTAGG CAGCGGTTAT GCTAGCCCGT TTAGCTTACA AATTGGCGAT CCAAACACTA TTGCTGCCCT TACCGGCATT GCTACGGTGG CCGATTTTCG TCGCAAAGAC GTGGCCCTAG GCGGCCAAGG AGCACCACTT GTGCCAGCGT TTCATGCGGC TGTTTTTGGC AGCACTACAA CCGATAGATG TATCGCCAAC ATTGGCGGTA TAGCTAACAT TACCTGCCTA CCCGCAAATA GCCATATTGC TGGCTACGAT ACAGGCCCTG GGAACGCGTT GATGGACGCA TGGATAGAGG CCAATCAAGG CGCTAAATAC GACGCAGGTG GCGCGTGGGC GCAAACCGGC AAGCTTAACC AGCCGCTGCT AGAAATATTG CTGCAACACC CCTATTTCGC GCTGCCAGCC CCTAAAAGCA CTGGCCGCGA AGACTTTAAT ATGACATGGC TACAGGCCTG TCTAAACCAA ACGAATTTAC CGCTACCACC CGAAGATGTG CAGGCCACGC TCACAGAATT GACGGCTATA AGCCTAACCG ACGGCGTAAA ACGAAGCTGC CCCAACGCTG AGCTGGTCAT TTGTGGCGGC GGAGCCTTTA ACACCGCCCT ACTTGAACGC ATTCAACACC ATTACCCCCA AAAGCCCACA GTAACGAGCC AGCAGCTTGG TATAGCACCA ACATGGGTAG AAGCCATGGC CTTTGCTTGG TTGGCTATGC GCAGGCTAGA AAACCAACCG GGCAATGTCC CTGCAGTAAC TGGCGCTAGT CGTGAAGCGG TGTTGGGCGG CATATACACA CCCTAA
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Protein sequence | MKPSLFVGVM SGTSADGIDV ALVDFSQATP ALVGSESHAY PNHIREHVLG LCTPANNEID ALGQLDVELG KLYAHAVNSL LANTQTPAAQ IQAIGCHGQT LRHRPLGSGY ASPFSLQIGD PNTIAALTGI ATVADFRRKD VALGGQGAPL VPAFHAAVFG STTTDRCIAN IGGIANITCL PANSHIAGYD TGPGNALMDA WIEANQGAKY DAGGAWAQTG KLNQPLLEIL LQHPYFALPA PKSTGREDFN MTWLQACLNQ TNLPLPPEDV QATLTELTAI SLTDGVKRSC PNAELVICGG GAFNTALLER IQHHYPQKPT VTSQQLGIAP TWVEAMAFAW LAMRRLENQP GNVPAVTGAS REAVLGGIYT P
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