| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1069 |
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| Symbol | |
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| ID | 3968233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1369940 |
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| End bp | 1371304 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920137 |
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| Product | decarboxylase family protein |
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| Protein accession | YP_526543 |
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| Protein GI | 90020716 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.317311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCATT CTGAGCCTGT AAAGCTAACC CCAGATCACA CCATGAACGT GCTTTCACAA
ATTGAAGTTG CACGTTTAAT AGATAAAGCA GACACCCATG TTTACGAAAC CTTTCGTCGC
TGTGCGCTGG CGGTGTTAAA TACGGGGGCC GACACCGATA ACGTAGCCGA GGTGCTAGAG
GAATTTGCCG AATTTGCGGT AAACGTTATT CAGCAAGAAA GAGGTATTAA GCTCGAGCTA
ATAAATGCAC CAGAAACGGC ATTTGTAGAT GGCGAGATGA TAGCCGGTAT TAAGCAGCAT
GTGTTTTCCG CTTTGCGCGA TATTATTTAC ATTAGTAACG AGCTTACCGA AAACCGCGAT
ATAGACTTAT CTCGTTCTGC CGGTATTACC AACGCTGTAT TTCACATAGT GCGCAATGCG
GGCTTGCTGC GCGGCAATGC CGACTCTCAC ATGATAGTGT GTTGGGGGGG GCACTCTATT
AACGAAGTAG AATACAAATA CACCAAAAAA GTAGGCTACG AAATGGGCCT GCGAGGCTTA
GATATTTGCA CCGGCTGCGG CCCAGGTGCC ATGAAAGGCC CTATGAAAGG CGCAACTATA
GGCCATGCTA AGCAGCGCTT AACTGGGCGT TATATTGGCA TTACCGAACC CAGCATTATT
GCCGCGGAAT CGCCTAACCC TATTGTGAAC CAACTAGTAA TACTGCCCGA TATTGAAAAG
CGCTTGGAAG CGTTTGTGCG CACAGGTCAC GGCATTATTG TGTTTCCTGG CGGCGTGGGC
ACTGCCGAAG AAATTTTATA TATATTGGGT ATATTGTTGC ACCCCAAAAA CAAAGATATC
CCATTTCCAT TAATTTTTAC TGGGCCAAAA GAGTCGGCCG CCTATTTCGA TAAAATTAAT
GAATTTATTG GTGTAACACT TGGTAAAGAG GCGCAAGGCA AGTATCAAAT TATTGTAGAT
AACCCCGCTG AAGTTGCGCG CGCAATGAGC CGCAGTATGG AAACTGTGCG CGCGTTCAGG
CGCAGTACAC AAGACGCGTA TTATTTTAAC TGGGTACTGC ATATCGATTT AGATTTTCAG
CTGCCGTTCC AGCCGAATCA TACCAATATG GCACAGCTCG ATTTACACAA AAATCAGCCA
GTAGATAAAC TCGCGGCTAA CCTGCGTAAA GCCTTTAGTG GCATTGTAGA TGGCAATGTA
AAAGAGCACG GTATTAAAGC GGTGGCAGAA AAAGGCCCTT ACAAAATTAA AGGTGACCAA
GAAATTATGG AGCCTTTAGA CGCATTATTG CGCGATTTTG TAAGCCAGCA CCGTATGAAA
ATTCCAACGC AGGAATATAT ACCCTGCTAC GAAGTTGTAA GTTAG
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| Protein sequence | MIHSEPVKLT PDHTMNVLSQ IEVARLIDKA DTHVYETFRR CALAVLNTGA DTDNVAEVLE
EFAEFAVNVI QQERGIKLEL INAPETAFVD GEMIAGIKQH VFSALRDIIY ISNELTENRD
IDLSRSAGIT NAVFHIVRNA GLLRGNADSH MIVCWGGHSI NEVEYKYTKK VGYEMGLRGL
DICTGCGPGA MKGPMKGATI GHAKQRLTGR YIGITEPSII AAESPNPIVN QLVILPDIEK
RLEAFVRTGH GIIVFPGGVG TAEEILYILG ILLHPKNKDI PFPLIFTGPK ESAAYFDKIN
EFIGVTLGKE AQGKYQIIVD NPAEVARAMS RSMETVRAFR RSTQDAYYFN WVLHIDLDFQ
LPFQPNHTNM AQLDLHKNQP VDKLAANLRK AFSGIVDGNV KEHGIKAVAE KGPYKIKGDQ
EIMEPLDALL RDFVSQHRMK IPTQEYIPCY EVVS
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