| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1015 |
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| Symbol | |
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| ID | 3967769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1297042 |
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| End bp | 1299114 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920082 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_526489 |
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| Protein GI | 90020662 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTGC GCAAACAACT GTTTTTTGTA AGCCTAATTA CCCTTACCCT ACCTTGGGCT
GGCTGCCAGT ACGTAAAAGA AATGGAACAA ACTCTGCGCA CAGGGCAAAG CGAGGCCCTT
ACTGCCACTG CTATGGCCGC AGCAGCCCGC CTAAGTAGCG ACCCAGCCGC TGTAATGCAA
TTGCAACAGT TAGGCACCCC CGCTGGCTTA ACGCCGCTGT ACGCCCACCC TATGGCCACT
GCCGTAGTAC CCGACGGCTA CGACGATGAA TGGGTAACTG CTGGCCTAGC AAGACAAGGG
CTCGCCGCCC CCAGTGGCGA AAAAGCCCAA ATAGTGGCCG GTAGCTACCA GCGCTCACTG
TATTTATTTC TGCGCAGCTA CAACAACCCC AAACAATACT ATTCACCTTC ACAGCGCTCG
CCCATTGAAA GTGATCACCT ACGTATAAAA CTGCGCAATG AACTAGGCCA AGAGCAAACA
CTGCTGGTAT ACACCAGCGT ACCCGGCCGC GCATCTGTCG ACCGACTTAT AGAAAACAAC
CGCACCGTGG CCGAGCACAA AGTAATTTGC CACTGGCTGG AGTGGCAAGA TGGCTATCAC
ATTGAACTAG AGCTACCACT TACGTGGGCC AAAGGAGGAA TAGAAGTTTA CTTAACCCAA
GCACTAGCAA GCGACGCCAG CAAACAAGCA TTATTGAGCA ACCGTCAAAA CAATCAAACC
GCGTTAATAG CACCGCTCAT CACACCGTCT GAGATTTTGG CCAACGAGCT AGCGATATTT
AGCCGCACCG GCGTGCAACT TCATGTTGCG TCTTCCGGCG TAAAACGCCT TGCGAGCACC
GGCAACCTCA ATGCACCGGC CAGTAAAAAA TTAAAAGAAC AACACGGTTT AATCAGTTGG
CTATATACCC TTGCTTTGGG TAACGACAAA TTACCAGAGC TAGATAACGT GCAAACAAGC
GGACAATTTG AAACGCCCGA AGTGAGCTTG GCGCTGCAAA ATACATCTGC ACAAGGCGTA
TATCAAAAAG GCGCCAAACG CCTTTTGCGC GTTGCCGTAC CTATTTTGGC CAACGGTGAT
AAAAACGCCC AACCATTGGG CGTTGTCATT GCCGATCAAA ACGCCGACTC GCTGGCCACT
ATGACCAACA GCGCTTTTAA CCGCCTAATT ATGTACTCTT TAGGCACAGT CTTTATAGCC
GCATTCGCGT TAATTATTTA CGCAAGCTGG ATATCCATGC GTATTGGCCG CTTAAGCCAA
GCGGCAGTAA ACGCGGTGAG CGAAACCGGA AAAATATCGG ACGACTTCCC CATTTTAAAT
AGCAAAGATG AAGTGGGCGA TTTATCTCGC AGCTTTGGCC AGCTACTTGC TCGACTGCGT
GAATACACCC ATTACTTGCG CACCCTTTCT AGCAAACTTT CCCACGAGCT GCGCACGCCC
TTAGCTATTG TGCGCTCATC GCTCGACAAC CTTGAACATG TGAAACTTTC GAAAGAAGCC
AAGGTATACG CCGAGCGCGC GCGCGAAGGT ACGCTGCGGT TATCTAGCAT TTTAAATTCC
ATGAGTGCCG CCAGCCGTGT AGAGCAAGCA ATAAGCGGCG CAGACATAGA AGATATTCCC
GCCAATGAAT TGCTTAGCAG CCTAAAAGCC GCCTACGAAG ATGTGTATAA ACACGTCGAC
TTTAAATTAA ATATTCGCGA CGATGGCCAA GATTTTACCT TGCGTGGCTC TGGTGAATTA
CTGGTGCAAA TGCTCGATAA ACTGGTAGAT AACGCGGCCG ACTTCTGCCC GCAGCAAGGG
CTAATAGAAC TGGGCCTGTA CCGCAACAAT AATCACATAA TGATCACTGT GCGCAACGAT
GGCCCACCCC TGCCTAGCCA TATGCACGGT CAGCTTTTTG ATTCGATGGT ATCGGTAAGA
GATAAAACAG ATGAGCGCCA GCACCACCTA GGATTAGGCT TGTACATTGT GCGTCTTATT
GTAGATTTTC ACCGCGGCGA AGTGCAGGGT TACAACATTC CAGACAATAG CGGTGTTATT
TTTGAAATAA AATTACCCGT AAAAGGCAGC TAA
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| Protein sequence | MRLRKQLFFV SLITLTLPWA GCQYVKEMEQ TLRTGQSEAL TATAMAAAAR LSSDPAAVMQ
LQQLGTPAGL TPLYAHPMAT AVVPDGYDDE WVTAGLARQG LAAPSGEKAQ IVAGSYQRSL
YLFLRSYNNP KQYYSPSQRS PIESDHLRIK LRNELGQEQT LLVYTSVPGR ASVDRLIENN
RTVAEHKVIC HWLEWQDGYH IELELPLTWA KGGIEVYLTQ ALASDASKQA LLSNRQNNQT
ALIAPLITPS EILANELAIF SRTGVQLHVA SSGVKRLAST GNLNAPASKK LKEQHGLISW
LYTLALGNDK LPELDNVQTS GQFETPEVSL ALQNTSAQGV YQKGAKRLLR VAVPILANGD
KNAQPLGVVI ADQNADSLAT MTNSAFNRLI MYSLGTVFIA AFALIIYASW ISMRIGRLSQ
AAVNAVSETG KISDDFPILN SKDEVGDLSR SFGQLLARLR EYTHYLRTLS SKLSHELRTP
LAIVRSSLDN LEHVKLSKEA KVYAERAREG TLRLSSILNS MSAASRVEQA ISGADIEDIP
ANELLSSLKA AYEDVYKHVD FKLNIRDDGQ DFTLRGSGEL LVQMLDKLVD NAADFCPQQG
LIELGLYRNN NHIMITVRND GPPLPSHMHG QLFDSMVSVR DKTDERQHHL GLGLYIVRLI
VDFHRGEVQG YNIPDNSGVI FEIKLPVKGS
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