| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1002 |
|---|
| Symbol | |
|---|
| ID | 3965127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1284558 |
|---|
| End bp | 1285022 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637920069 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526476 |
|---|
| Protein GI | 90020649 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.527815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA TTGTGATATC CGTAGATAGG TTTGCCAAAA AGCTTGCAGA CATTATTCCT
GCTTGGGCCA CAAACCTAAC CCTGCGCGCA GGTATCTTTT TTGTATTTTG GAATTCCGTG
CAAACAAAAC TTGGCGGCGG AAGTTATTTT GGCCAAAAGC TCGAGTTTTG GCGAGTAACA
GAAAGCACTA AAATGCTGTT CGAATACGAA TACGCGCTAC CTATAATACC CGCAGAAATA
GCCGCATACA TGGCGACTCT TGGTGAGTTC TTTTTAGGGT TAGGTATTTT ATTTGGCTTT
TTTACGCGAC TCTCTGCATT TGGCTTACTT ATAATGACAC TCGTCATTCA GGTTTTTGTA
TACCCTGGGT CGTGGAGCGT ACATTTACTT TGGGCAGGCG CTTTAATTTA CTTACTTAAG
GATGGTGGCG GCCTAGTCTC TATTGACCGA CTACTACACA GATAA
|
|---|
| Protein sequence | MKNIVISVDR FAKKLADIIP AWATNLTLRA GIFFVFWNSV QTKLGGGSYF GQKLEFWRVT
ESTKMLFEYE YALPIIPAEI AAYMATLGEF FLGLGILFGF FTRLSAFGLL IMTLVIQVFV
YPGSWSVHLL WAGALIYLLK DGGGLVSIDR LLHR
|
|---|
| |