| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0956 |
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| Symbol | |
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| ID | 3967671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1241393 |
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| End bp | 1242568 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637920023 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_526430 |
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| Protein GI | 90020603 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00245688 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000175975 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATAG CCATACCAAG GGAGCGTCGC GCCTGCGAGA AGCGAGTTGC GGCTACCCCT
GAAACCGTAA AGAAATATGT AGGTATGGGG TTTGAAGTGC TAGTGGAAAA AGACGCTGGT
ACTGCAAGCC GCTATATGGA TGACCAATAC GTTGCTGCTG GTGCAAGCAT TATTGGCTCG
ATGCAAGAGT TGTACTCGCA GGCGGATATT GTGCTTAAGG TGCAGCGCCC ACTGTTGGCG
AGCGAAGGTG GTGAAGATGA GTTGGGGTGC ATGAAGTCGG GTGCGTTACT TCTCGCTGTG
CTATCACCTT ACTCTGCACC GGAGGCGCTT GATGCGTATG CCAAACAAGG CGTGATAGCA
ATCGCGTTAG AGTTTGTGCC GCGTATTACG CGCGCGCAAA GTATGGATGT GCTCAGTTCG
CAAAGTAACT TGGCGGGCTA TCGCGCAGTG TTAGATGCCG CTTACGAATA TGGTCGTGGC
TTCCCTATGA TGATGACTGC TGCAGGTACC ATCGCGCCGG CACGTGTAAT GGTGCTGGGG
GCAGGTGTTG CAGGCTTGCA GGCTATTGCT ACGGCTAAGC GATTGGGGGC TATTGTGTCG
GCAACCGATG TTCGCCCTGT AGCGAAAGAG CAGGTGGAAA GCTTGGGTGG CAAGTTCGTG
ATGGTGGAGT CGGATGAGCT TAAAGATGCT GAAACGGCCG GCGGTTATGC CAAAGAAATG
AGCGATGACT TCAAGCGCAA GCAGGCTGCC CTAGTGGCTG AAACGCTCGC TAAGCAAGAT
ATTGCGATTT GTACCGCGCT TATTCCCGGT CGCAAGGCGC CAACGCTAAT TACTGATGAG
ATGGTTCACA GTATGAAACC GGGCTCGATC ATTGTGGATT TGGCGGTTGA GCAGGGCGGT
AACTGTACCC TGTCCAAGCC TGGCGAGGTG GTGGAGGTTA ACGGGGTGAA GATTGTTGGT
CACTTTAACG TGCCTTCGCG GGTAGCGACT GATGCCAGTG CGTTGTTTGC AAAAAACTTG
CTCAACTATT TGACGCCCCA TGTTAAAGCT GGCGAAGGCT CGGTCGAGCT TGCGCTGGAT
TGGGCTGATG AAATTGTTGC TGCCAGTGTG CTTACGCGTG CAGGGGATAT CGTTCATCCA
AATTTCGCGG CACCTGCTGC TGCGGCTAAC CAATAG
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| Protein sequence | MKIAIPRERR ACEKRVAATP ETVKKYVGMG FEVLVEKDAG TASRYMDDQY VAAGASIIGS
MQELYSQADI VLKVQRPLLA SEGGEDELGC MKSGALLLAV LSPYSAPEAL DAYAKQGVIA
IALEFVPRIT RAQSMDVLSS QSNLAGYRAV LDAAYEYGRG FPMMMTAAGT IAPARVMVLG
AGVAGLQAIA TAKRLGAIVS ATDVRPVAKE QVESLGGKFV MVESDELKDA ETAGGYAKEM
SDDFKRKQAA LVAETLAKQD IAICTALIPG RKAPTLITDE MVHSMKPGSI IVDLAVEQGG
NCTLSKPGEV VEVNGVKIVG HFNVPSRVAT DASALFAKNL LNYLTPHVKA GEGSVELALD
WADEIVAASV LTRAGDIVHP NFAAPAAAAN Q
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