| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0917 |
|---|
| Symbol | |
|---|
| ID | 3965553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1182490 |
|---|
| End bp | 1183161 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637919979 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526391 |
|---|
| Protein GI | 90020564 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000260853 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000167824 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTGC CAAACGGCGG TGTTGCGGGC GCGGCGAGTC ACGCGGAGGC GGAGTTTGAG
CTAAAGGGGG TGCCACCTTT GCTGCTGCTC ACCGAGGTCG ATATCGAGCA GCGCACGGCG
CCTGCTGAGC GGCTAATTAG TGAAATCCCG GTTTTACCTT CTTCAGAGGG TGAGCGGCGG
AGCGAAGAAA AAGAAAAGAA GTTGTGTGAA ATATTGGGGC CATTTGATGG TGAGCCGAGT
GCGCAGGAAA TGGTGGAGCG CTTGCGAGCG CTGGATGTGC ACAGTGAAGT ACGTACTTTG
CAGTTACCTG CAGGTCCAGG TTACTGGGTT TATTTGGAAC CAGAGCCCAA TCGTAAGGCT
GCCTTGCGAA AATTAGCTGA ATTGCAGTCT CGGGGGGTGG ATAGCTATGT GATACCCAAG
GGAGAGATCG AAAATGGCAT TTCATTGGGA ATGTTTAGTA AAAAGTCGCT AGCGGATAGT
CGAATGGCTG AAGCTGAGCG CATGGGATTG AGTCCGCGCA TGCAAACCAT CGAGCGAACC
TATCGCGAGG TGTGGGTGAT GTTAAATCAC CAAGAAGATG AAAAAATGAG CGAAATTAGC
TGGTCAAGAG TACTAGAAGA TAAAAAAATG CTCCAGAGAC GAGAAAATTT CTGTTTAGAT
GTTGCGTCCT AG
|
|---|
| Protein sequence | MLLPNGGVAG AASHAEAEFE LKGVPPLLLL TEVDIEQRTA PAERLISEIP VLPSSEGERR
SEEKEKKLCE ILGPFDGEPS AQEMVERLRA LDVHSEVRTL QLPAGPGYWV YLEPEPNRKA
ALRKLAELQS RGVDSYVIPK GEIENGISLG MFSKKSLADS RMAEAERMGL SPRMQTIERT
YREVWVMLNH QEDEKMSEIS WSRVLEDKKM LQRRENFCLD VAS
|
|---|
| |