Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0880 |
Symbol | |
ID | 3968814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1139381 |
End bp | 1139674 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919942 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_526354 |
Protein GI | 90020527 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3695] Predicted methylated DNA-protein cysteine methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.473234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00013814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAAAG ACGCAATTTA CATTGCACTC GCTCAAATCC CACAGGGTAA AGTAGTAAGC TATGGCGAAC TTGGCCGCCG CGCAGGACTA GCGAACGCGG GCCGTTATGT GGGCACCACT TTAAAGCAGC TGCCCCCTAA TACGCAATTA CCTTGGCATA GAGTGGTCAA CAGCAAGCGT GAGCTTTCGT TCCCAGAAGG GTCTGAATGC CATGTGCGGC AAAGGCGGCG TCTTGAAGCC GAAGGCATAG TATTTATTAA CGGTCGCATC GACAAATCTA ACTTTATTAA TTAG
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Protein sequence | MSKDAIYIAL AQIPQGKVVS YGELGRRAGL ANAGRYVGTT LKQLPPNTQL PWHRVVNSKR ELSFPEGSEC HVRQRRRLEA EGIVFINGRI DKSNFIN
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