| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0873 |
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| Symbol | |
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| ID | 3968807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1129453 |
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| End bp | 1131195 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637919935 |
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| Product | hypothetical protein |
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| Protein accession | YP_526347 |
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| Protein GI | 90020520 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.386857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA TTGCCTCCAT CACAACCTTG ATTGTTACGA TTTTAGTAAC AGCTATAATT
TACATACCAG GGACATCCAG CCCACTGCAA CTTGACTCCC TAAAGCTGTA CCAATTAGAA
CGCATATACA ACAAAAGCGG CCTAGACATT TCACTGCAGG ATATCAAATT TGGGAATAAC
CTAGGAAGAT ATGTCTCACA AGCAAGCTTT TACCTAAACA TCCACGCAAG CTCCAAATTA
GATTCCGCTA ATATAAAGAG AACCAATTTA GCCATTCACT TGGCTTGCGG GGTGCTAATA
TTCCTCTTTT CGTTGAACAT CTCAGGAGCA ACTAATTACT CTCCGCACAA GTACACAATA
GCGGCAATTA CATCAAGCCT GTGGCTGCTA GCCCCCATGA ATATAAGCAG TGTTTTATAT
GCCGTTCAAA GGATGACCCA ACTCGCCACA TTGTTCTCGC TTGCCTCGCT AATCTTATAC
CTTCAAAGCA GAAAGTACTT CCAATCGAAA GCAGCATCAC ATAAAGGAAT CATGTGCGCT
TTACTATCAA TTGCGGCATT CCTATTAGCA ATCCAAAGTA AAGAAATAGG GGTATTAACT
ATAACGTATC TAATTCTCAT TGAACTGCTC ATTTTCAGAG TTAGACCTAG TTCAAAATTC
ATTTTCCTAG GCTTGGCAGC TTGCATTATC GCTGCAGGAG CTTTGCTACA ATTCGCTCAA
CTACCGGACT ACTCTGAAAA GCCATTTACT TTAGCAGAAC GCCTACTCAC CCAAACTGTA
ATTGTATCTG AGTACGTGCA AAACCTAATA CTTCCCACCT CAATAGAGAT TGGTATCTAC
CAAGACAATC ACACAATATC TAAATCACTC ACAGATCCAA TAAGCACCCT GCTTTGCACC
ATCGCCATAG CATTAATAAC TACAGCCTGC TTATTTTTTT CTCGCTTCAA GTCCACATCT
CTACCCGTAT TTGGGGTGCT GTTCTTTTTT GCAGGTCACT TACTAGAAAG CACAATTCTA
CCAATAGAGC TGTATTTTGA GCATAGAAAC TATGCCCCTA GCATTGGGGT GTACTTAACT
TTAAGTCTAT TAACACTAGG CTGCGGCCTT AAATACGGTA TAAAGATTCC AGCGCTCATC
CTATCAGTGT ATATCGCAGC ATTTATAACA ATAGATATAC TTAGAGTCAG CAACTGGAAC
TCACCGCAAC GAGCACTGGA ACTTTCTGCT TACAGAGAGC CTCCATCTGG TCGAGCTTTG
AGCAATCTCG TGCAACTACA CTTAAACAAA GGAGACGTAT CGCGAGCACG GAAAACGCTC
AACTATCTGA TCGAATCTGT TCCTGAACGC AGGTTTTCTG CACTACTACA AAGCATGTAT
ATAAGCTGCT TAACGGGTAT CCCTCCACAA GAGCAAATCT ACAATCAGCT TACTAACGCT
GTATCCGTTT ACTCTAAAAT TGAAGCTTCA CACGCTATCA ATAACGTGAT TCATGCAATA
GAAAAAACAA ACTGTACAAG CATCGACCTA AACAAACTAA GCGACAGTCT GCTAAAGCAC
TCCGAGAGGA CTCGCTTGCC GGCTTCATCA AGCTGGTATA TTGACTACTA TATTGCAAAG
ATCTACTCTC TCCAATCCAC TAGAAAAGCA ATAGATTATC TTTATCAACT AGGTCTTTCG
GGGAACGATA AAGCACTTTT ATATGCAGAA GAGCTTGCAA GTGATCAACA ACAGAACCAA
TAA
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| Protein sequence | MQKIASITTL IVTILVTAII YIPGTSSPLQ LDSLKLYQLE RIYNKSGLDI SLQDIKFGNN
LGRYVSQASF YLNIHASSKL DSANIKRTNL AIHLACGVLI FLFSLNISGA TNYSPHKYTI
AAITSSLWLL APMNISSVLY AVQRMTQLAT LFSLASLILY LQSRKYFQSK AASHKGIMCA
LLSIAAFLLA IQSKEIGVLT ITYLILIELL IFRVRPSSKF IFLGLAACII AAGALLQFAQ
LPDYSEKPFT LAERLLTQTV IVSEYVQNLI LPTSIEIGIY QDNHTISKSL TDPISTLLCT
IAIALITTAC LFFSRFKSTS LPVFGVLFFF AGHLLESTIL PIELYFEHRN YAPSIGVYLT
LSLLTLGCGL KYGIKIPALI LSVYIAAFIT IDILRVSNWN SPQRALELSA YREPPSGRAL
SNLVQLHLNK GDVSRARKTL NYLIESVPER RFSALLQSMY ISCLTGIPPQ EQIYNQLTNA
VSVYSKIEAS HAINNVIHAI EKTNCTSIDL NKLSDSLLKH SERTRLPASS SWYIDYYIAK
IYSLQSTRKA IDYLYQLGLS GNDKALLYAE ELASDQQQNQ
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