| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0856 |
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| Symbol | |
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| ID | 3965205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1111093 |
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| End bp | 1113846 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919918 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_526330 |
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| Protein GI | 90020503 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0137755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGCA AAATATTACG CAGCATCTTT GGCTCTAAAA ACGATCGTGA ATTAAAGCGA
ATGGGCAAGC AGGTAAAACT CATTAATGAG TTAGAGTCTA CTTTCGTGAA GCTAACGGAT
GAAGAGCTAA AAGCTAAAAC GGCTGAGTTT AAAAAACGAC ATCAAGATGG CGAAAGCTTA
AATGCGCTGC TGCCCGAAGC TTTTGCCGCT GCTAGAGAAG CGAGTAAGCG CGTTATGGGT
ATGCGCCATT TTGATGTACA GCTTATTGGT GGTATGACGC TGCACGAGGG CTGCATAGCT
GAGATGCGCA CTGGTGAGGG TAAAACCCTT ATGGCGACAC TCGCAGCCTA CTTAAACGCA
ATTTCGGGCA AGGGTGTGCA TATTGTTACT GTGAACGACT ACCTTGCTCG CCGCGACGCT
AATTGGATGA CACCACTATA CGCCGCGCTA GGGCTGACTA CTGGGTCTGT GTATTCAATG
CAGCCACAGC AGGAGAAGCG TGAAGCATAC GCAGCCGACA TTACTTACGG CACTAACAAC
GAGTTCGGTT TTGATTATTT GCGCGACAAT ATGGCGTTGC GTAAAGAAGA TCGCATGCAG
CGCCCATTAA ACTTTGCCAT TGTGGATGAG GTGGATTCGA TCCTTATCGA TGAGGCTCGT
ACTCCATTGA TTATTTCTGG GGCAGCAGAA GATAGCTCTG AGCTGTACCG CGCCATAAAT
AAGTTTATCC CTTCGCTGAA GCGCCAAGAA ATTGTTGAAA AAGGCGAAGA GCCCAGTGAA
TTAGGCCATT ACACCCTAGA CGAGAAAACG CGTCAGGTAG AGCTTACCGA AATGGGCCAT
GAGGTTATCG AGGATACACT TACTAAAGCG GGCCTGCTGA AAGAAGATGA TAGCTTGTAC
GCCGCTGGCA ATTTAGGTTT ATTGCATCAC GTGTACGCCG CACTAAAAGC GCATGTGCTT
TTCCATCGCA ATGTTGAATA TATTATTCAA AACGATCAGG TCGTGCTTAT CGATGAGCAT
ACGGGTCGTA CTATGGCGGG GCGGAGGTTG TCTGAAGGTT TGCACCAAGC TTTGGAAGCC
AAAGAAGGCC TGCAAATTCA GGCAGAGAGC CAAACGCTTG CTTCTACAAC TTTCCAGAAC
TATTTTCGTA TTTATCCCAA GCTCTCTGGT ATGACCGGTA CAGCGGATAC TGAAGCGTTT
GAGTTCCGTC ATATTTACGG TTTAAATGTT GTGGTAATCC CAACCAATAA ACCTATTCAG
CGTACAGACT TGAACGACCT TGTATTCTTG TCGGTGGAAG AAAAGTACGA AGCGATTGTG
CGCGATGTTA ATGAGTACCG CGCTAAAGGT GTACCGGTAT TGGTGGGTAC GGCGTCGGTT
GAAACATCCG AGGCGATGTC TGAGCGTTTA AAAAAGGCGG ATATCCCCCA CGAAGTACTT
AACGCAAAAC AGCATGAGCG CGAAGCTGAA ATTATTGCCA ATGCGGGCCG TCCAGGTAAT
GTGACCATCG CAACCAACAT GGCTGGCCGT GGCACCGATA TTGTATTGGG TGGTAACCTT
GAGGCTGAAC TGGCTAAATT GGAAAACCCA ACAGAAGAGC AAATTGCCAA GGTGAAGAGC
GAGTGGCAAA CCCGTCACGA CCAAGTCGTT GCCGCGGGTG GTTTGCATAT TATTGGAACC
GAACGCCACG AATCTCGCCG CATTGATAAC CAGTTACGCG GTCGTGCAGG GCGTCAGGGC
GACCCTGGTT TGTCTCGCTT CTACCTATCT TTAGAAGACA ACTTGATGCG TATATTCGCG
TCGGATCGCA TGCGCAGCTT TATGCAATCT ATCGGTATGG AGAAAGGCGA AGCGATTGAG
CACCGCATGG TGACTAACGC CATCGAAAAA GCTCAGCGCA AAGTGGAAGG GCGGAACTTC
GACTACCGTA AGCAAATATT GGAATACGAT GATGTTGCTA ACGATCAGCG CCGTGTAATT
TACTCGCAGC GTAATGAATT GTTAGATGCC GACGAAATCC ACGACGCTAT TGATGGTATT
CGTCAAGATG TTATAGCTGA TGTGATTGCA GGCTTCATTC CACCACAAAG TGTAGAAGAG
CAATGGGATG TGGCGGGGCT GGAGCAAAGC TTAGCCAACG AATACGGAGT GCAACTGCCT
ATTCAAAAAT GGTTGGATGA TGACGATAAG CTAAATGAAG AGAGCTTGCG CGATAAGATT
ACCCAAGCAA TGGATGATGC TTACAATGTT AAGCGCGAGC AGTTGGGCAA CTCCGTTGTC
ATGCTAGAAA AACAATTGAT GCTGCATGTA TTGGATCAGT TGTGGAAAGA GCACCTACAA
AACATGGATC ACTTGCGTCA AGGTATTGGG TTACGTGCGT ACGCACAGAA AAACCCCAAG
CAAGAATACA AGCGCGAATC GTTTGAAATG TTCCAGACCT TGCTAGAGAG CTTAAAGCAC
GACGTTATTC GCCTGTTGTT CCGCGTGCAG CCCATGACCG AAGAACAAAT GAATGAAATG
GAAAAGCGCA GGCAAGAAGA GGCCGAGCGT CAGCGTCAAA GAATGCAGCT TCGTCACGCA
GAAGCGCCTT CGCAGTTAGC GGCGCCAGCC ACCCCAGCCA CACCAGAAGA GCTAAGCGAA
CTCAAGCCAG AGCGCCCCTA TGTGCGCGGC GGCTCTAAAG TTGGCCGTAA CGACCCGTGC
CCATGTGGTT CGGGCCAAAA ATATAAATCT TGCCACGGCA AGTTGACGGG CTAA
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| Protein sequence | MFGKILRSIF GSKNDRELKR MGKQVKLINE LESTFVKLTD EELKAKTAEF KKRHQDGESL
NALLPEAFAA AREASKRVMG MRHFDVQLIG GMTLHEGCIA EMRTGEGKTL MATLAAYLNA
ISGKGVHIVT VNDYLARRDA NWMTPLYAAL GLTTGSVYSM QPQQEKREAY AADITYGTNN
EFGFDYLRDN MALRKEDRMQ RPLNFAIVDE VDSILIDEAR TPLIISGAAE DSSELYRAIN
KFIPSLKRQE IVEKGEEPSE LGHYTLDEKT RQVELTEMGH EVIEDTLTKA GLLKEDDSLY
AAGNLGLLHH VYAALKAHVL FHRNVEYIIQ NDQVVLIDEH TGRTMAGRRL SEGLHQALEA
KEGLQIQAES QTLASTTFQN YFRIYPKLSG MTGTADTEAF EFRHIYGLNV VVIPTNKPIQ
RTDLNDLVFL SVEEKYEAIV RDVNEYRAKG VPVLVGTASV ETSEAMSERL KKADIPHEVL
NAKQHEREAE IIANAGRPGN VTIATNMAGR GTDIVLGGNL EAELAKLENP TEEQIAKVKS
EWQTRHDQVV AAGGLHIIGT ERHESRRIDN QLRGRAGRQG DPGLSRFYLS LEDNLMRIFA
SDRMRSFMQS IGMEKGEAIE HRMVTNAIEK AQRKVEGRNF DYRKQILEYD DVANDQRRVI
YSQRNELLDA DEIHDAIDGI RQDVIADVIA GFIPPQSVEE QWDVAGLEQS LANEYGVQLP
IQKWLDDDDK LNEESLRDKI TQAMDDAYNV KREQLGNSVV MLEKQLMLHV LDQLWKEHLQ
NMDHLRQGIG LRAYAQKNPK QEYKRESFEM FQTLLESLKH DVIRLLFRVQ PMTEEQMNEM
EKRRQEEAER QRQRMQLRHA EAPSQLAAPA TPATPEELSE LKPERPYVRG GSKVGRNDPC
PCGSGQKYKS CHGKLTG
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