| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0845 |
|---|
| Symbol | |
|---|
| ID | 3965802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1097787 |
|---|
| End bp | 1098869 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637919907 |
|---|
| Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
|---|
| Protein accession | YP_526319 |
|---|
| Protein GI | 90020492 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | [TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTAT GGCTTGCAGA ATATTTACAG CAATACATAA GCGCTTTTGC GGTTGTGAAG
TACTTAACCT TTCGCGCTAT TTTGGGGGTA ATGACTGCCC TAGGTTTATC GTTACTACTT
GGCCCTTGGG TTATTAACAA GCTCAACAAG TTACAAATAG GTCAGTCAAT TCGCGACGAC
GGGCCAGAGA GTCACTTGGT GAAAAGCGGT ACCCCTACAA TGGGCGGCAC GCTTATTTTA
TTTGCCATAG TGTTCGCCAC GCTTTTGTGG TCTGACTTAA CTAACCGCTA TGTGCTTGCG
GTGTTGTTTG TCACTTTGTC GTTTGGGCTT GTAGGTTGGG TAGATGATTA CCGTAAGGTA
GTACAAAAAA ATTCAAAGGG CTTGCCTGCT AAATGGAAGT ACTTTTGGCA ATCGCTAGCG
GGTTTTACCG TCGCATATGG CTTATATGTC ACGGCGCAAA TACCGGAAGA AACAACGTTA
TACATTCCGT TTTTTAAAGG TGTAGCGTTA GAGCTGGGTG TGTTTTACAT CATTCTTACT
TATTTTATGG TGGTTGGTTT TAGCAACGCA GTAAATTTAA CCGATGGCCT CGATGGGTTG
GCCATTATGC CAACTGTAAT GGTTGGCTCT GCATTGGGCA TAATCGCGTA CCTTGTAGGT
AACGCAAATT TCTCTGCCTA TTTGCAAATA CCTTATGTGC CAGGTGCCGG CGAACTAGTT
GTTTATTGTG CGGCGTTGGC TGGGGCAGGG TTAGGCTTTT TGTGGTTTAA CACTTACCCC
GCACAAGTAT TTATGGGCGA CGTGGGTGCA TTAGCACTGG GTGCTGCACT TGGCATTATT
GCTGTAATTG TTCGCCATGA AATTGTATTC ATTATTATGT CGGGCATTTT CGTTATGGAA
ACTGTGTCGG TCATATTGCA GGTTGCCTCG TTTAAATTAA CGGGCCGCCG AATTTTTAGA
ATGGCGCCTT TACACCATCA TTTTGAGTTA AAAGGGTGGC CCGAGCCGCG TGTAATAGTG
CGTTTTTGGA TTATTACCGT CATGTTGGTT CTATTTGGCT TGGCAACACT CAAGCTGCGA
TAG
|
|---|
| Protein sequence | MLLWLAEYLQ QYISAFAVVK YLTFRAILGV MTALGLSLLL GPWVINKLNK LQIGQSIRDD
GPESHLVKSG TPTMGGTLIL FAIVFATLLW SDLTNRYVLA VLFVTLSFGL VGWVDDYRKV
VQKNSKGLPA KWKYFWQSLA GFTVAYGLYV TAQIPEETTL YIPFFKGVAL ELGVFYIILT
YFMVVGFSNA VNLTDGLDGL AIMPTVMVGS ALGIIAYLVG NANFSAYLQI PYVPGAGELV
VYCAALAGAG LGFLWFNTYP AQVFMGDVGA LALGAALGII AVIVRHEIVF IIMSGIFVME
TVSVILQVAS FKLTGRRIFR MAPLHHHFEL KGWPEPRVIV RFWIITVMLV LFGLATLKLR
|
|---|
| |