| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0795 |
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| Symbol | |
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| ID | 3966394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1026757 |
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| End bp | 1029138 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637919857 |
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| Product | thiamine monophosphate synthase |
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| Protein accession | YP_526269 |
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| Protein GI | 90020442 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.651448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.277241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAG TAATAACACC GGTGCGCTTT GCTGCTTTTT TGTTCTTTCA GGCTATTGCT
ACTACGGCAG CAGCGGCTGA CGAAGGCTTG GTGGGTCTAA GTTTAGAAGA GCTGCTGAAT
ATAGAAGTAA GCACAGGCAG CTTACTTAAA AACTCTACAG ACGATGCGCC TGCTGCTATA
ACCATTATTC GTAAAGATCA AATCGAAATA TCCGGTGCTA AAAACCTAGC TAATTTATTG
GAGCAGCATG TGCCGGGCAT GATGCTTATG AGCCACTCCG AAGGCGACAA AATTGGCCTG
CGCGGTTTAA TTGCTGCCGA AAACTACAAG TTACTACTGT TAGTAAACGG TAAAAATATT
ACCAATATGG TGTACGAAGG CGCCATTTTA GAAATAGACC AATGGGACAT GGGCGATATT
GAACGGGTAG AGGTTATACG TGGCCCAGGC TCGGTAACCT ATGGTACGGG TGCCATTGCA
GGCATCATTA ATATTATTAC TAAAACCCCG CATTCAGATT CGCCTGCATT TAGTGTTGGA
TTGGCAAGCA ATAACACCTA TCAAAGCCGA GGCATTAGTG CACAATTCAA TAAAAGTGTT
AACCAATTTG GTGCCTACGG GTTTTTATCT TACAGAAAAA CAGATGGGTA CCAAAAACCT
GACTATTTTT CTATGTCGCC CAGCGATGAG ACGGATATAC GTTTTGTGGG TAAACGCCCT
ACGGATACGC TCGGCCCGCA AGCATACCTT GCCGATGGCG TAGATAGGCC GCAAATTAAA
GCGCATTTGG GGCTAGAGTA CGGCGAAAAT TTTAGTTCAT GGCTGCGCTA TACCCAATCT
GGTCAAACGC GTTTTTTTAT ACAGCAAAGA GCGAAAGAGG ATGCGCAGGG TTATGTGGTT
GGAACGGTAA ATCGCCGCAG TCCAAGCACG CGTAGTTTGG TCTTTTCTAC AACGTATAAT
TTGGTTTTGT CGGATGTGTC TAATGTTGCT AGCTCGCTGA CTTACGATAG CCAAGAATAT
ATTCGTCACG ATTATCTAAA CCCTCGTTGG AGCCTTACGC ATGAAAATAA TGTGCGCGAT
TACGGCTTCG CACAAAATAG GTTACGCGGG ACTGTTTTAT ACGAATATAC CCCTGATGAT
AAGTTTAATA TTGTTGCAGG TTACGAGTAT GCCAATATTG ATGTGCACGC CCCTTGGGGA
AAAAGCAGCG ATCATTTGCT CATTCAAGAG GGTGTGCATT TTGTAAGTGA TGTTGATTCA
AGTGTGTATC TGCAAGACTT AACCTTAAAC AACAGACCAA ACCCCGATAG GGTGTTGGAG
GTCGGCTCAG GGATAAATTC AGAAACTCAT TCGCTTTTGC TAGAAACACG TTTTAATGTG
TCTGAGCGCA ATCAGCTTTT TTATGCACAC AGGGTCGATT TTCCCGATGT AGCAGAAACA
ATGTTCTCCC CCAGGTTGTC GTGGGTGAAT AAAGTTAACC CAGAAAACAC CCTTGTAGCC
ACTGTTCAGC GCGCACAAAG AATGATGCCC CTGCGTGCAC AATATCAAAA TCATTTAATG
CAAGAAGAGT CTAAGTTAGA AACGTTAGAT GGTGCCGAAG TGTCATACAC CAACCGCTAT
TACAGTAATA CATCGTTAAA TGTGCGCAGC TTCTATAACG ATATTTCTGC GGTTGGCTTT
ACCGGTAGTA ATTTAGAGTT TTTAACAGAT GTAAAAATAG GCGGGGTTGA GTTCACTGGT
AGCTATACAA CCCAAACAAC GGAGCTAACC TTTAGTCACG CCTATCTGGG TGTGTTAGAT
GTAGCAATGA ATGAGAGTTT AAAAACGGGC GCATCGCGCA ATAATATTTC ATTTGCAGAC
TATTATTACA TCCCTCGTGG TGATATTCCC GTGTTACTGG AGAGCTACGG CAATGGTTTA
AATAATATTG TTAGCCATAC TTCTAAATTT CTAATCAGCA AAAAGTTTTT AAATAATCGT
TTAATTGCCC ACGCAAATGC ACAGATATTT TGGGATTTCG ATGGTTCTTA CGACGAGATG
GAAATGTATC AACGCGCATA CGATACCTTC AATACGGCAG AGCTGCCTGC TGAAGATTTA
GCTTTGTTCA CTGAACAAAA GCGTCAGTTC GAACGCGAGC GATACTTATT GGATAAAACC
GACAGCTATA AGCTCGACTA CGCATTAAAT GTTTCGCTTA GTTATACCCA CTCTTTGAAT
AAAAAAGCCG ATGTTCGAGT GAAGCTATTT GCCGAAAATA TTTTGCACTC TAAAAATCGC
TACAATGTAA GCACCGGCTC TAGCCGTTTC TACCCAGAGC GCTTTAATTT TATGGTAGAA
CCGGTAGCTA TTGGTATGTC GGTTACTCTC GATTTAAATT AG
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| Protein sequence | MPKVITPVRF AAFLFFQAIA TTAAAADEGL VGLSLEELLN IEVSTGSLLK NSTDDAPAAI
TIIRKDQIEI SGAKNLANLL EQHVPGMMLM SHSEGDKIGL RGLIAAENYK LLLLVNGKNI
TNMVYEGAIL EIDQWDMGDI ERVEVIRGPG SVTYGTGAIA GIINIITKTP HSDSPAFSVG
LASNNTYQSR GISAQFNKSV NQFGAYGFLS YRKTDGYQKP DYFSMSPSDE TDIRFVGKRP
TDTLGPQAYL ADGVDRPQIK AHLGLEYGEN FSSWLRYTQS GQTRFFIQQR AKEDAQGYVV
GTVNRRSPST RSLVFSTTYN LVLSDVSNVA SSLTYDSQEY IRHDYLNPRW SLTHENNVRD
YGFAQNRLRG TVLYEYTPDD KFNIVAGYEY ANIDVHAPWG KSSDHLLIQE GVHFVSDVDS
SVYLQDLTLN NRPNPDRVLE VGSGINSETH SLLLETRFNV SERNQLFYAH RVDFPDVAET
MFSPRLSWVN KVNPENTLVA TVQRAQRMMP LRAQYQNHLM QEESKLETLD GAEVSYTNRY
YSNTSLNVRS FYNDISAVGF TGSNLEFLTD VKIGGVEFTG SYTTQTTELT FSHAYLGVLD
VAMNESLKTG ASRNNISFAD YYYIPRGDIP VLLESYGNGL NNIVSHTSKF LISKKFLNNR
LIAHANAQIF WDFDGSYDEM EMYQRAYDTF NTAELPAEDL ALFTEQKRQF ERERYLLDKT
DSYKLDYALN VSLSYTHSLN KKADVRVKLF AENILHSKNR YNVSTGSSRF YPERFNFMVE
PVAIGMSVTL DLN
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