Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0732 |
Symbol | |
ID | 3966253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 945652 |
End bp | 946926 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637919794 |
Product | hypothetical protein |
Protein accession | YP_526206 |
Protein GI | 90020379 |
COG category | [S] Function unknown |
COG ID | [COG2718] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCTACA TAATAGATAG ACGACTCAAC TCCAAAAAGA AGAGCACAGT AAATCGCCAA CGTTTTTTAC GACGCTATAA ACAGCACATC AAAAAAGCTG TTTCCGACGC GATAGATAAA CGCTCGATTC AAGATATGGA TCGCGGCGAA AAAATTGGCA TTCCTTCCAA AGACATCAGC GAACCCGTAT TTCACCACGA CTCCGGCGGC GTCGACACAC GCGTATTACC CGGCAACGAT CAATTTCATT CAGGCGATAG AATTCAACGC CCACCATCGG GCCAAGGCGG TGGCGGCTCT GGCAAAGGCG CCAGCGATAG CGGCGAAGGG ATGGATGAAT TTGTATTCCA AATTACCCAG GAAGAGTTCC TCAACTTTAT GTTCGAGGAT TTAGCCCTGC CCAATTTAGT CAAACGCCAA CTTGCAGGCA TAGAAGAGTT CGAAATGCGA CGCGCGGGGT TTAGCAACGA AGGCTCGCCA GGCAAAATAA ACGTGGTGCG CTCGCTGCGC TCAGCCAACT CTAGGCGCAT TGCGCTTACA AGCAAAAAGC GCAAACAACT TAAAGAGCTA GAAGCGCGTA TTGCCCAACT GCAAGCCGAG CCCATAGCCG ACTCTGCCAC AGAACTTGAA GAGCTAGAAG CCGAGGCCGC CAAGCTGCGC GCAAAAATAA AACGCGTGCC GTGGTTAGAC ACCTTCGACT TAAAATACAA CCTGCATGTT AAGCACCCTA TTCCGCATTC GCGCGCAGTA ATGTTCTGTT TAATGGATGT ATCCGGCTCG ATGGACCAAG CCACAAAAGA CGTGGCAAAG CGGTTCTTCT TGCTGCTTTT TTTATTTTTA CAGCGCAACT ACGAAAAAAT AGAAGTGGTA TTTATTCGTC ACCACACCAG TGCCAAAGAA GTTAACGAAG AGGAGTTTTT CTATAGCCGC GAAACCGGCG GTACCATTGT ATCTAGCGCC TTACACTTAA TGGATGAAAT TATTCGCGAG CGCTACCCAC CCAATCAGTG GAATATTTAT GGCGCACAGG CATCCGACGG CGATAACTGG AACGACGATT CCACCACCTG CTACAAGGTG CTTACCGAAA ATATTATGCC CAAGGTGCAA TACTTTTCGT ATATAGAAAT CACCCCGCGG GATCATCAAG CCCTGTGGGC TGCCTACGAA AGTGTGCTGC GCGACTTCCC CAAAAGTTTT GCAATGCGCC AACTAGAGGG GGCAGATGAG ATCTACCCCG TTTTCAGAGA CTTATTCCAG AAGCAGGTCG CATGA
|
Protein sequence | MSYIIDRRLN SKKKSTVNRQ RFLRRYKQHI KKAVSDAIDK RSIQDMDRGE KIGIPSKDIS EPVFHHDSGG VDTRVLPGND QFHSGDRIQR PPSGQGGGGS GKGASDSGEG MDEFVFQITQ EEFLNFMFED LALPNLVKRQ LAGIEEFEMR RAGFSNEGSP GKINVVRSLR SANSRRIALT SKKRKQLKEL EARIAQLQAE PIADSATELE ELEAEAAKLR AKIKRVPWLD TFDLKYNLHV KHPIPHSRAV MFCLMDVSGS MDQATKDVAK RFFLLLFLFL QRNYEKIEVV FIRHHTSAKE VNEEEFFYSR ETGGTIVSSA LHLMDEIIRE RYPPNQWNIY GAQASDGDNW NDDSTTCYKV LTENIMPKVQ YFSYIEITPR DHQALWAAYE SVLRDFPKSF AMRQLEGADE IYPVFRDLFQ KQVA
|
| |