Gene Sde_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0732 
Symbol 
ID3966253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp945652 
End bp946926 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content49% 
IMG OID637919794 
Producthypothetical protein 
Protein accessionYP_526206 
Protein GI90020379 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCTACA TAATAGATAG ACGACTCAAC TCCAAAAAGA AGAGCACAGT AAATCGCCAA 
CGTTTTTTAC GACGCTATAA ACAGCACATC AAAAAAGCTG TTTCCGACGC GATAGATAAA
CGCTCGATTC AAGATATGGA TCGCGGCGAA AAAATTGGCA TTCCTTCCAA AGACATCAGC
GAACCCGTAT TTCACCACGA CTCCGGCGGC GTCGACACAC GCGTATTACC CGGCAACGAT
CAATTTCATT CAGGCGATAG AATTCAACGC CCACCATCGG GCCAAGGCGG TGGCGGCTCT
GGCAAAGGCG CCAGCGATAG CGGCGAAGGG ATGGATGAAT TTGTATTCCA AATTACCCAG
GAAGAGTTCC TCAACTTTAT GTTCGAGGAT TTAGCCCTGC CCAATTTAGT CAAACGCCAA
CTTGCAGGCA TAGAAGAGTT CGAAATGCGA CGCGCGGGGT TTAGCAACGA AGGCTCGCCA
GGCAAAATAA ACGTGGTGCG CTCGCTGCGC TCAGCCAACT CTAGGCGCAT TGCGCTTACA
AGCAAAAAGC GCAAACAACT TAAAGAGCTA GAAGCGCGTA TTGCCCAACT GCAAGCCGAG
CCCATAGCCG ACTCTGCCAC AGAACTTGAA GAGCTAGAAG CCGAGGCCGC CAAGCTGCGC
GCAAAAATAA AACGCGTGCC GTGGTTAGAC ACCTTCGACT TAAAATACAA CCTGCATGTT
AAGCACCCTA TTCCGCATTC GCGCGCAGTA ATGTTCTGTT TAATGGATGT ATCCGGCTCG
ATGGACCAAG CCACAAAAGA CGTGGCAAAG CGGTTCTTCT TGCTGCTTTT TTTATTTTTA
CAGCGCAACT ACGAAAAAAT AGAAGTGGTA TTTATTCGTC ACCACACCAG TGCCAAAGAA
GTTAACGAAG AGGAGTTTTT CTATAGCCGC GAAACCGGCG GTACCATTGT ATCTAGCGCC
TTACACTTAA TGGATGAAAT TATTCGCGAG CGCTACCCAC CCAATCAGTG GAATATTTAT
GGCGCACAGG CATCCGACGG CGATAACTGG AACGACGATT CCACCACCTG CTACAAGGTG
CTTACCGAAA ATATTATGCC CAAGGTGCAA TACTTTTCGT ATATAGAAAT CACCCCGCGG
GATCATCAAG CCCTGTGGGC TGCCTACGAA AGTGTGCTGC GCGACTTCCC CAAAAGTTTT
GCAATGCGCC AACTAGAGGG GGCAGATGAG ATCTACCCCG TTTTCAGAGA CTTATTCCAG
AAGCAGGTCG CATGA
 
Protein sequence
MSYIIDRRLN SKKKSTVNRQ RFLRRYKQHI KKAVSDAIDK RSIQDMDRGE KIGIPSKDIS 
EPVFHHDSGG VDTRVLPGND QFHSGDRIQR PPSGQGGGGS GKGASDSGEG MDEFVFQITQ
EEFLNFMFED LALPNLVKRQ LAGIEEFEMR RAGFSNEGSP GKINVVRSLR SANSRRIALT
SKKRKQLKEL EARIAQLQAE PIADSATELE ELEAEAAKLR AKIKRVPWLD TFDLKYNLHV
KHPIPHSRAV MFCLMDVSGS MDQATKDVAK RFFLLLFLFL QRNYEKIEVV FIRHHTSAKE
VNEEEFFYSR ETGGTIVSSA LHLMDEIIRE RYPPNQWNIY GAQASDGDNW NDDSTTCYKV
LTENIMPKVQ YFSYIEITPR DHQALWAAYE SVLRDFPKSF AMRQLEGADE IYPVFRDLFQ
KQVA