| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0719 |
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| Symbol | rpsU |
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| ID | 3965279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 930612 |
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| End bp | 930827 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637919781 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_526193 |
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| Protein GI | 90020366 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00024481 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTCAG TTAAACTGAA AGAAAACGAG CCATTTGACG TAGCATTACG TCGTTTTAAG
CGTTCATGCG AAAAAGCTGG TGTACTTGCT GAAGTACGTC GTCGTGAATT CTACGAGAAG
CCAACTTCTG TTCGTAAGCG TAAAGCAGCT GCTGCTGTTA AGCGTCACGC TAAAAAGGTT
CAGCGCGAAA ACCGCAAGTT CCAACGTTTG TACTAG
|
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| Protein sequence | MPSVKLKENE PFDVALRRFK RSCEKAGVLA EVRRREFYEK PTSVRKRKAA AAVKRHAKKV
QRENRKFQRL Y
|
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| |