Gene Sde_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0707 
Symbol 
ID3966304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp916722 
End bp917141 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content40% 
IMG OID637919768 
Producthypothetical protein 
Protein accessionYP_526181 
Protein GI90020354 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.133766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA TTACCTACCC TATTAAAGGA GCTTGCCAAT GTGGAGGTGT AACTTATGAT 
CTTCTTGAGC CACCGTTATT AGTGGCTGCT TGTCATTGTA AGGAGTGTCA AAAATTATCC
ACTAGTGCAT TTAGTATCAC TGCAATGGTA AACGCTAGCA GCGTTAAGTT TAGCGGTTTA
ATGAAAGATT GGAGCCGCTC AGCGGATAGC GGAAATATCA GCGCAGCCAA GTTTTGTCCG
TCTTGCGGGA ATAGAATTTA TCATTACAAC CCTGATGAAC CGGATAAAAT AAAACTTAAA
CCCTGCAATT TATCCGACAC TAGAATAATA AAACCAACCG TACACGTATG GGTTAGCGAA
AAACAAGATT GGTTCAACAT TCCCGAAGGC GTAAAAACCT TTGATAAACA ACCACAGTAA
 
Protein sequence
MDNITYPIKG ACQCGGVTYD LLEPPLLVAA CHCKECQKLS TSAFSITAMV NASSVKFSGL 
MKDWSRSADS GNISAAKFCP SCGNRIYHYN PDEPDKIKLK PCNLSDTRII KPTVHVWVSE
KQDWFNIPEG VKTFDKQPQ