Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0707 |
Symbol | |
ID | 3966304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 916722 |
End bp | 917141 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637919768 |
Product | hypothetical protein |
Protein accession | YP_526181 |
Protein GI | 90020354 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.133766 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATA TTACCTACCC TATTAAAGGA GCTTGCCAAT GTGGAGGTGT AACTTATGAT CTTCTTGAGC CACCGTTATT AGTGGCTGCT TGTCATTGTA AGGAGTGTCA AAAATTATCC ACTAGTGCAT TTAGTATCAC TGCAATGGTA AACGCTAGCA GCGTTAAGTT TAGCGGTTTA ATGAAAGATT GGAGCCGCTC AGCGGATAGC GGAAATATCA GCGCAGCCAA GTTTTGTCCG TCTTGCGGGA ATAGAATTTA TCATTACAAC CCTGATGAAC CGGATAAAAT AAAACTTAAA CCCTGCAATT TATCCGACAC TAGAATAATA AAACCAACCG TACACGTATG GGTTAGCGAA AAACAAGATT GGTTCAACAT TCCCGAAGGC GTAAAAACCT TTGATAAACA ACCACAGTAA
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Protein sequence | MDNITYPIKG ACQCGGVTYD LLEPPLLVAA CHCKECQKLS TSAFSITAMV NASSVKFSGL MKDWSRSADS GNISAAKFCP SCGNRIYHYN PDEPDKIKLK PCNLSDTRII KPTVHVWVSE KQDWFNIPEG VKTFDKQPQ
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