| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0702 |
|---|
| Symbol | |
|---|
| ID | 3966299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 909112 |
|---|
| End bp | 911151 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637919763 |
|---|
| Product | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
|---|
| Protein accession | YP_526176 |
|---|
| Protein GI | 90020349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.463009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0291956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA TACTTAGCCG CTGCTGGTCA ATCTCACTAC TGCTTATTTT CTCACTAATC
GTCTCTGCCT GTGGTGGAGG TGGCGGAACA AGCACAGCTG CACCCGAGAC TAATAATACC
GGTGGCACAG GAGGCGGCAA CTATAGTATT TCGCTAAACA AAACTAGCTT AACGTTTACC
GGCAATACAG ATGGCAACGT TTCTGCTGGT ATCGAGGTTC GTGTTACCTA TAAAGGTGAC
GGCGTAATAG TTGGCTTTCC CCCTAATATC GATACGGCAT ATTGGCTAGA TGTTACAACG
CGGGACTACA CCGCTACTAC CGCTACCTTT TTAGTTGCCG CTTCGCCCAG CTACAGCGCA
GGTGAATTTT CAACAACCCT GCGCTTTATA ACAGGCAAGG AAGATGGCAG TGCTACGCGC
TATATAGATT TGCCCGTTAC CTTTACAGTT TCGGAATCGT TTAGCACTTA TTCTGCGCAG
CCCACGCCGT TCAGTTTTAG CTCTGTGGGG CGCGATAGCT CTAACCTTTC TGATGTGGCT
TACGCCATTA ATATTGTGGG TGCCGACTCC CAATGGACAG TCGCCTCTGA AGACTGGATT
TCTGTTAGCC CTACCAGCGG TAATGGACAG GCAACTCTCA CTGTAACCGT AGACCCAAAT
ATAGCCCAAT ACGGTACTAA CGTTGGCACC ATTGAAATTA GCGATTCAGT TTCCGGCAAT
AGCTTCTCGT ACAATGTACG CTATCAAATG GATCACGCTA GTGTAAGTGT AGATACATCT
GAACACTTCT TTGCTGTGCT CCCCACCACA ACTTCGGCAG AATTAGTTGG CACCATTGCC
ATTGCTGATG AGCTGCAGGG CAACTCACCA GAAGACGTGT ACACATGGGA ATTTATTTCT
AGCAGTGAAG ATTGGCTTAG CCTTACAAGT AATAGTGGCA CCACCGCGGC GGGGGAAACC
ACCCCAGTAT TGCAAGTAGA TAAAACCACC CTTTTACAAA ATGCCGCGGG CGAGCGTTAT
GAAGCAGAAA TAACAATAAA CACCCGCAGT GATTTTGCTG ATACGCAAAC ACATGTAATT
AAAGTTAGTA CGTTTATCGC ATCTGAACCT ATTGCGGTCA CCGGCAGCAC TGCCAACGAG
TTTGCCTTTA CTGTTAACAG AGCTGCGCAT GCCAGCGCAA ATAACAAGCT CTACCTATCA
GATACGAATG CAAACAGACT CTACGTAGCC GATGCAACCA GCGGTGAAAC ACTGTTTTAT
TATCCGTTTA ATGAAATGCC TGAATCGGTA TATGTATCAC CCGATGGCAG TCGCCTTTAC
GTTGCCTTGT TACATCACGA ACACGACTAT TTTCAACACG AGCCGAGCGG GAAAATAGCA
GTAATCGACT TGGAGAACGG CTTATTAATT AATAAATTTG CAATTAACGC CGACCCTTGG
GATTTAGTCG CATCGGATGC GGGCGAAGTT TACGTTATAC CTGGCTCTGG CCAATGGGTA
GAGTTAAACA TGTACGATGC AAAAACAGGC AAAATTTTAT ATACCAGCGT TAGCCTGCGT
CATCGCAGTC AAATTATTCT CGCGCCTTGG CAAACAGAAG TTTATACGGT TACTACCGAC
AGCTCGCCTT CAGATATTAC ACGCTACTAT CTCGACAGCT ATAACGGTGA AGAATTTTTA
AATTCGCAAG ACTCCCCCTA CCACGGTGAC TACCGAATTT GGGATGACAT ATGGATAGAA
CCAACAGGGG ATAATATTCT TAGCCGTGGC GGTGACTTAT TCAGTACAGA TGGCCTTATA
TTTGTGAAGG CTGTTAGCCC AAGCGGCGTA CAAATTAATG ATGTTGCCTA CGATACTGTT
GGCGAACGTG CGGTACTTTT AGATAATAAC GGCACGCTCG CAAGCTACGC TTTACCCAAT
TACGATAATT ACCAAGTAAT AAGCAACACC CTGCAAGACC CCAAACACGT ATTTACCTAT
AACGGCGAAA TATTGGTTAT AGATAACACC GAGACAGTCT ATAAACTTAT TAAGCCATAA
|
|---|
| Protein sequence | MKHILSRCWS ISLLLIFSLI VSACGGGGGT STAAPETNNT GGTGGGNYSI SLNKTSLTFT
GNTDGNVSAG IEVRVTYKGD GVIVGFPPNI DTAYWLDVTT RDYTATTATF LVAASPSYSA
GEFSTTLRFI TGKEDGSATR YIDLPVTFTV SESFSTYSAQ PTPFSFSSVG RDSSNLSDVA
YAINIVGADS QWTVASEDWI SVSPTSGNGQ ATLTVTVDPN IAQYGTNVGT IEISDSVSGN
SFSYNVRYQM DHASVSVDTS EHFFAVLPTT TSAELVGTIA IADELQGNSP EDVYTWEFIS
SSEDWLSLTS NSGTTAAGET TPVLQVDKTT LLQNAAGERY EAEITINTRS DFADTQTHVI
KVSTFIASEP IAVTGSTANE FAFTVNRAAH ASANNKLYLS DTNANRLYVA DATSGETLFY
YPFNEMPESV YVSPDGSRLY VALLHHEHDY FQHEPSGKIA VIDLENGLLI NKFAINADPW
DLVASDAGEV YVIPGSGQWV ELNMYDAKTG KILYTSVSLR HRSQIILAPW QTEVYTVTTD
SSPSDITRYY LDSYNGEEFL NSQDSPYHGD YRIWDDIWIE PTGDNILSRG GDLFSTDGLI
FVKAVSPSGV QINDVAYDTV GERAVLLDNN GTLASYALPN YDNYQVISNT LQDPKHVFTY
NGEILVIDNT ETVYKLIKP
|
|---|
| |