| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0693 |
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| Symbol | |
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| ID | 3964944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 895885 |
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| End bp | 896658 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919754 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_526167 |
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| Protein GI | 90020340 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.444699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000042345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAATACCA ACACCAAAAG AAAGCCAATA GTTATAGCAA ATTGGAAACT CAACGGCGGC
CTAGAGCTAA TCTGCACCTC GGTTGCTTCG TTTATAGGCA AGCACTTCGA GGCAGATATT
GCTATTTGCC CACCCTACAT TTACATGCGC GATATGCTTA CCTTCCTGCA ACATTCAGAA
ATTAGCATTG GCAGCCAAAA CGTAAGTAAG TTTAAGTCGG GTGCTTATAC CGGTGAAACC
TCTGCGCAAA TGCTCAAAGA AGCAGGTTGT AAGCTGTGCT TAATCGGCCA CTCTGAGCGC
CGATCTATGT TTAAAGAAAA TAACCTAAGC TGCCAAATTA AAATTGGCAA CGCGCTAAAC
CACGGCCTTA TGCCCATATT GTGCGTAGGT GAAAACAAAG AAGAGCACGA CGCTAAAATC
ACTAAAGATG TGATCTTCCG TCAGGTTACC GAGTGTTTAG AAGGCGTAGA GCTAGATGGC
CGTAAAATTT GTATCGCTTA TGAACCTATT TGGGCAATAG GCACCGGCGC CTCAGCTACC
CCAGAAATTG CACAGGATGT ACATTCGTTT ATTCGACAAG AACTAATAAA ATTGTACGGC
GAAGAAACCG CTAACAGCAT CCGCTTGCTG TACGGCGGCA GCGTAACCAA AGACAACGCC
AAAGACCTAC TCGCCAAAGA AGATGTAGAC GGCCTACTTG TAGGCGGCGC CAGCTTAGAC
CCAGGCCACT TTTTGGCTAT TTGCCAGCAC GCCTCAGATT CTTCTGCTAG CTAA
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| Protein sequence | MNTNTKRKPI VIANWKLNGG LELICTSVAS FIGKHFEADI AICPPYIYMR DMLTFLQHSE
ISIGSQNVSK FKSGAYTGET SAQMLKEAGC KLCLIGHSER RSMFKENNLS CQIKIGNALN
HGLMPILCVG ENKEEHDAKI TKDVIFRQVT ECLEGVELDG RKICIAYEPI WAIGTGASAT
PEIAQDVHSF IRQELIKLYG EETANSIRLL YGGSVTKDNA KDLLAKEDVD GLLVGGASLD
PGHFLAICQH ASDSSAS
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