| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0686 |
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| Symbol | |
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| ID | 3964937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 874343 |
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| End bp | 875347 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919747 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_526160 |
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| Protein GI | 90020333 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000244214 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACAA TAAAAGATGT CGCACGCGTT GCGGGCGTAT CCACAGCCAC GGTTTCGCGC
GTAGTACACA ACGGCGGTCA AGTAGGTGAT GCGTGCCGCG CACGGGTTAA AAAGGTAATT
GCTGAGTTAG GTTACCGGCC CAATACAAAT GCCCGCGCTT TGGTAAGTAA AAAAAGCGAT
ACCCTTGGTG TGGTAACGCC GCGTTTATCG ATGACCTTCT TTGGCACGCT CGCCGCAGGG
GTAGAAAATG CCGCGCGCGA AAATAGCTAT AAATTGTTAA TGAGTAACTC TCTCTACGAA
ACCGAAACAG AATTAGAAGC CATAGAATCA CTGCGCGAAC ACAGTTGCAA TGCAATTATT
CTACACAGCG AATACTCCGA CGAAAAAACA TTGCAAGAGC TTGCACGGCA AGTGCCTGGC
TTGGTGTTAA TTAATCGCTT TTTGCCCAGT ATGGCGAATC GCTGCGTGTG GTTAGATAAC
GTCGCCGGTG GCAAAAAAAT TACCGAATAC TTAATTGAGC GCGGCCACAA GCAATTTGCA
GTAGTAACCA GTGTGTATCA AAACAACGAC CCGCAATCGC GTTTAACGGG TGTAAAAGAA
GCATTAAAAA ATGCCGGTTT AAAAATGCCC GCTAATAATA TTGTTGAGTC CACGGCCAAT
ATGCGCGGTG GTGAAGAAGC CGTGCAAGAA TTATTAAAAC GCGGCGCAAA ATTTACAGCG
GTAGTTGCTT ATAACGATTT AATGGCCGTA GGTGCAATGA ACGCATTGCA AGATGCTGGC
ATACGCGTGC CAGAAGATGT GTCGGTAGTA GGTTTCGACG ATTTATACAT CACGCGCGCC
TGCCGCCCCA AACTCACCAC CATGAGCTAC CCCATAGAAG AAATGGCCAA CTACGCCGCA
AAGCTGGCAA TAGACCTAAG TACCAACCCC AGCAATGTAC AAAACCGCAC CCATCTGTTT
ATGCCCGAGC TAATCGAGCG CAATTCGGTG GCGGATATTA GCTAA
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| Protein sequence | MATIKDVARV AGVSTATVSR VVHNGGQVGD ACRARVKKVI AELGYRPNTN ARALVSKKSD
TLGVVTPRLS MTFFGTLAAG VENAARENSY KLLMSNSLYE TETELEAIES LREHSCNAII
LHSEYSDEKT LQELARQVPG LVLINRFLPS MANRCVWLDN VAGGKKITEY LIERGHKQFA
VVTSVYQNND PQSRLTGVKE ALKNAGLKMP ANNIVESTAN MRGGEEAVQE LLKRGAKFTA
VVAYNDLMAV GAMNALQDAG IRVPEDVSVV GFDDLYITRA CRPKLTTMSY PIEEMANYAA
KLAIDLSTNP SNVQNRTHLF MPELIERNSV ADIS
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