| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0638 |
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| Symbol | |
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| ID | 3964967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 806475 |
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| End bp | 808772 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919699 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_526112 |
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| Protein GI | 90020285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.248233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG TACACAACCT TGGATTCCCC CGCATTGGTG CAAAGCGCGA GCTTAAGTTT
GCCTGTGAAG CCTATTGGCG CGGCGAGATA GACCAAACGC AACTCGATAA AACTGCGCAC
ACCTTGCGTG CAAACCATTG GCAAACACAG CTAGACGCCG GTGTAGAGTG GCTGCCTGTT
GGCGATTTTT CTTATTACGA CCATGTTCTA GACACCAGCT TTTTGGTGGG CAATATTCCT
GTGCGGGCGC AAGCGGATGG GCAATCTAAG CTAGATACTT ACTTTAAAGT GGCTCGAGGC
ACCGCCAAAG AAGCGGCGGG TGCCAGTTGT TGTGGCGGCA GTCACGCAGC CGAAATGACC
AAGTGGTTTG ATACTAACTA CCACTATTTG GTGCCAGAGC TAAACGCAAA TACGCACTTC
AAGCTAAATG CCAGTAAATT ACTCACTGAG CTTGAGCAGG CGCGCGCGCT TACTAGCAAA
GTGAAGCCGG TTATTTTAGG GCCGCTAAGT TATTTATGGC TGGCAAAAAT AACAGACGGC
AGCACGCACA AGCTGGGCTT TTTAGATGAT TTAATTACAG TGTATCGCGA GTTGTTGGGA
ACGCTGGCCA AAGAGGCTGT AGAGTGGGTT CAGTTTGACG AGCCTATTTT AGCGCTAGAT
TTGCCCGAAC AGTGGCAGCA CGCCTTTGAG CGTGTATATC ACCAATTGCA GTTGCCCAAC
CTCTCTGTAT TGCTGGCCAC TTATTTTGGC CCGCTTGATA CAAATTTGCG GTTGGCTGCG
CGTTTACCCA CAGCTGCTTT GCATTTAGAT ATCACCCGCG GCGGCGATGA TTTACCGCGC
GTGTTAGATA TTTTATCGCC GCATAAAATT TTATCTGTAG GTGTCATAGA TGGCCGCAAT
ATTTGGAAAG CAGATTTAAA TAAACTACTC GCGCAATTAA AGCCCGTTAA AGAGCGGCTG
GGCAATGGCT TATGGTTGGC GCCAAGTTGT TCGCTGTTGC ATACGCCGGT AGATTTAGAT
AGCGAAGAGG CGTTAGATGC AGATATTAAA AACTGGTTGG CGTTTGCCAA ACAAAAACTG
CAAGAACTAA ATATTTTGCA GCGCGCATTG GATAACGGCG AGACCAGTGT GGCGGAAGCG
CTAGTACACA ACGCTGGCGC GATTGCCGCG CGTAAAGCAT CTGCAAAAGT AAACAACGCC
AAGGTGCAGT CGCTAGTCAA TAATATTAGC CCAAGCTTAA GCGAGCGCGA GTCACCCTTT
GCTACGCGAA TTGAAAAGCA ACAGGCGAAA TACAATTTAC CAACACTGCC AACTACAACC
ATTGGCTCTT TTCCGCAAAC AAGTGAAATA CGAAAAAACC GCAAAGCGTT TAAAAGTGGG
GAAATAAGCC AACAGCAATA CGATAGAACC CTGCGGGCAG AAATAGCGCA CGCAATAGAG
TTGCAAGAAA AAATAGGTAT CGATGTATTG GTGCATGGCG AAGCCGAACG CAACGACATG
GTGGAATATT TTGGTGAGCA ACTAGACGGC TACGTGTTCA CCCAGTTCGG TTGGGTGCAG
TCCTACGGCA GTCGCTGCGT AAAACCGCCA ATTATATTTG GTGATGTTTC TCGCCCAAGA
AAAATAACCG TAGACTGGGC CGAGTATGCC CAATCGCTAA CCTCTAAGCC CGTAAAAGGC
ATGCTTACTG GCCCAATTAC CATGCTGCAA TGGAGCTTTG TGCGCGATGA TCAGCCGCGC
AAAATAACGG CTCAGCAAAT TGCCTTGGCC CTGCGCAGCG AAGTGAATGA TTTGGAAGCC
GCAGGCATAA CGATTATTCA AGTGGATGAG CCCGCGCTGC GCGAAGGTTT ACCTCTGCGC
AAAAAGGATT GGCAAAACTA TTTAGATTGG GCTGTTGAGG CGTTCAAAAT ATCTACCGCA
GGTGTGGGCG ATACAACGCA AATACACACC CATATGTGTT ACGCCGAGTT TAACGATATT
ATTCAAGCTA TTGCCGATTT AGATGCAGAT GTAATCACCA TAGAAACATC TCGCTCGAAT
ATGGAGCTGT TAAGCGCATT TGAACAATTT AATTACCCTA ACGACATAGG CCCAGGCGTG
TACGATATTC ACAGCCCCAA CATACCGGCT ACAGAGCAAG TTGTGGGGTT AATTAAAAAA
GCGGCAGAAA ATTTACCGTT GCAACGCTTG TGGATAAACC CCGATTGTGG TTTAAAAACC
CGCAAGTGGG AAGATGTAAT ACCAGCGCTA GAGAATATGG TGAATGCTGC TAAACAGTTG
CGCGCAGAAG TGGCTTAG
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| Protein sequence | MTTVHNLGFP RIGAKRELKF ACEAYWRGEI DQTQLDKTAH TLRANHWQTQ LDAGVEWLPV
GDFSYYDHVL DTSFLVGNIP VRAQADGQSK LDTYFKVARG TAKEAAGASC CGGSHAAEMT
KWFDTNYHYL VPELNANTHF KLNASKLLTE LEQARALTSK VKPVILGPLS YLWLAKITDG
STHKLGFLDD LITVYRELLG TLAKEAVEWV QFDEPILALD LPEQWQHAFE RVYHQLQLPN
LSVLLATYFG PLDTNLRLAA RLPTAALHLD ITRGGDDLPR VLDILSPHKI LSVGVIDGRN
IWKADLNKLL AQLKPVKERL GNGLWLAPSC SLLHTPVDLD SEEALDADIK NWLAFAKQKL
QELNILQRAL DNGETSVAEA LVHNAGAIAA RKASAKVNNA KVQSLVNNIS PSLSERESPF
ATRIEKQQAK YNLPTLPTTT IGSFPQTSEI RKNRKAFKSG EISQQQYDRT LRAEIAHAIE
LQEKIGIDVL VHGEAERNDM VEYFGEQLDG YVFTQFGWVQ SYGSRCVKPP IIFGDVSRPR
KITVDWAEYA QSLTSKPVKG MLTGPITMLQ WSFVRDDQPR KITAQQIALA LRSEVNDLEA
AGITIIQVDE PALREGLPLR KKDWQNYLDW AVEAFKISTA GVGDTTQIHT HMCYAEFNDI
IQAIADLDAD VITIETSRSN MELLSAFEQF NYPNDIGPGV YDIHSPNIPA TEQVVGLIKK
AAENLPLQRL WINPDCGLKT RKWEDVIPAL ENMVNAAKQL RAEVA
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