| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0611 |
|---|
| Symbol | |
|---|
| ID | 3965018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 772787 |
|---|
| End bp | 773707 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637919674 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526087 |
|---|
| Protein GI | 90020260 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCAT GGGCGAACTC CTCATCACGG ACAGGCACGC TAACTCCTTC CTACCACCAA
CCACAAAGAG CAATTAGCGT TAACGATAAC GATAACGATA ACTACATATT TAGCGCGAAA
ATTGGCACCA GTAGTAGCGT AGAAAAGGTA GAGTTGGTTA TTCGCTATAA AAGCTGGCGA
GATTTCCACA GCATAGCAAT GCAACCAGAT GGCAAAGGCA ACTACAGCAC CAAGCCGCCT
AACGATGCTA TGTGGCAAGA GCCTGGGCCA CTGGAATACG CCATAGCCGT TACACAGGCC
GCGGGCACCA CAACATTCCC CGGCGGCGTT GAAGGGCACC CAAAAGACTG GAACTTTGTA
GCGGAAGACG GTTACTGGAA AATGGATTTA CAACCGACAG GGGTACCCAT AGATTTATTT
GATGCAAAAC TAGACGAAAA TAATTTAATC TACCCCAAAG ATGGCCGCAC CCAACAAAAC
TACACCAACG GTCAGTTTGG CAAAGGCAGT GCACTTAGTT TGGGCCTATA CGATTTAGAA
CCCAACAAAA TAAATGCGCT TAGTAAAGTA ACCCTTACCA AAAACAATGC GTTGCATTAC
CGCGATACAA AAGGCTACAA CACACTACTA ATTAAAATAC GCGCTACAAA CCAAGCAGAA
CAACTGAATA TAGGCGTGCT AGATGAGCAC GGGCTAGCCT ACACTCACAC ACTCACCATT
GGCACCAAAT GGCAATATAT GATGCTGCCG CTAAGTGACT TACGCAGCGG CATAACTATT
TTTGGCCAAG CTTACCCCAT GTTTTTGCCC TCTACCTTAG AAGCTAGCAA TAACAAAGCA
TGGCAAGGCA AGGCAAAACT GAGCCAATAC AGGGGCTGCA ATTTTACTTT GATAGTTCTG
CCTACGCTAA AAACGACTTA A
|
|---|
| Protein sequence | MNAWANSSSR TGTLTPSYHQ PQRAISVNDN DNDNYIFSAK IGTSSSVEKV ELVIRYKSWR
DFHSIAMQPD GKGNYSTKPP NDAMWQEPGP LEYAIAVTQA AGTTTFPGGV EGHPKDWNFV
AEDGYWKMDL QPTGVPIDLF DAKLDENNLI YPKDGRTQQN YTNGQFGKGS ALSLGLYDLE
PNKINALSKV TLTKNNALHY RDTKGYNTLL IKIRATNQAE QLNIGVLDEH GLAYTHTLTI
GTKWQYMMLP LSDLRSGITI FGQAYPMFLP STLEASNNKA WQGKAKLSQY RGCNFTLIVL
PTLKTT
|
|---|
| |