Gene Sde_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0517 
Symbol 
ID3965631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp636962 
End bp637570 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID637919580 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_525993 
Protein GI90020166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.243894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGCC ACAACAACAA GGATGCACTT ATGACCACAT CGCAAGATAA ACGAAAACAT 
TACTACTTCA CTTGGGGAAC ACTCAAACAA GGTTTTCCTA ACCACGACGC CAATAAAGAA
GTACTGGGCG ATCTTATTGG CAAATTTACA ACAGTTAAAC CTCTTTCACT AATCGTCCCA
CTCGCCAGCT TTTGCCCCAA CAAAGGTTGT AGGTTTGTTC ATCGTATTGG CGCTCTCACA
GAGAAGACTT TATCCCAAAG TGCCAAGCTC AAAGGCGAGG TTTACCTTAT TTCAGAAGCA
GGCCTTGCCC AACTAGACAA GCTCGAAAAT TACGATCCGA AATCAACAAC TAACTCCTAT
GTGCGAAAAA CAATAGATTT AGCTAACGAT GCCACCGGTG AAGTTATCAA TGCTTATATC
TACTTTATTA ATGACGCAGA AAAATATGAA GCGTTATTAC AAGTAAAACA AGCAGAAATC
GTTCCTGAGT ACACGCTCGA TATGGCCAGA GGAAAGTACA AACCTTGCTG TGAAGCTAAT
AGTAATCATC AGGGGCCTCA CGACGAACTC CCCTTCCCCA CTTTGCCCGA CAAAAATTAC
GCAATTTAA
 
Protein sequence
MLSHNNKDAL MTTSQDKRKH YYFTWGTLKQ GFPNHDANKE VLGDLIGKFT TVKPLSLIVP 
LASFCPNKGC RFVHRIGALT EKTLSQSAKL KGEVYLISEA GLAQLDKLEN YDPKSTTNSY
VRKTIDLAND ATGEVINAYI YFINDAEKYE ALLQVKQAEI VPEYTLDMAR GKYKPCCEAN
SNHQGPHDEL PFPTLPDKNY AI