| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0503 |
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| Symbol | |
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| ID | 3965617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 615993 |
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| End bp | 617444 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919566 |
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| Product | thiamine biosynthesis protein ThiI |
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| Protein accession | YP_525979 |
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| Protein GI | 90020152 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
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| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000447545 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTG TTGTTCGTTT ATTCCCTGAA ATATCCATCA AAAGTGCCCC CGTGCGCAAG
CGCTGGACAA AAATGCTAAC CGATAACTTA CGGTTGATGG CTAAGCGTAT CCATCCAACC
GCTAGGGTGA ACAAAGAGTG GGATCGTATC GAGGTGACGG CCAAGGTGGA TGACCCCGTT
GTGGAGGGGC AGTTAATCGA TATGTTGGCG CGTACACCGG GAATTGCGAA CTTTTCCCAT
GTGCAAACGC ACCCTTTTGA ATCATTGCAT GATATTTACG AGTTGGTACA AGCATCATGG
GGTGACCAAC TTAAGGGCAA AACCTTTTGT GTGCGAGTAA AGCGCACTGG CAACCACGAT
TTTACTTCTA CCGAAGTCGA GCGCTATGTG GGTGGTGGCC TTAATCAAAA TAACCCCACT
GGCGGCGTAA AACTAAAAGA CCCTGATGTG TCTATTGGTT TGGAAGTAAA AGATGATCAG
GTGTATTTGG TAACCAAAAA ATATCAGGGC TTAGGCGGCT TCCCCATGGG GACGCAGGAG
TCTGTGCTAT CTCTTATCTC TGGCGGCTAC GATTCTACCG TTGCCAGCTT TCAAATGATC
AAGCGCGGTT TGCGCACCCA TTACTGCTTT TTTAATTTAG GGGGGCGCGA GCACGAGCTA
GCAGTTAAAG AAATCGCGTT CTTTTTATGG AATCGATTCG GTTCTACTCA CCGCGTGCGT
TTTATCTCGG TGCCGTTTGA AGGTGTTGTA GGGGAAATTC TGCAAAAGGT TGGCCCTTCA
AATATGGGCG TAGTACTTAA GCGTATGATG TTGCGTGCAG GTGAGCGCAT TGCCGAGCGC
GGCGGTATTG AGGCAATGGT GACCGGCGAG GCGGTGGCGC AGGTATCGAG CCAAACCATT
CCCAACTTAT CTGTGATTGA TAGCGTTACC GATATGATGG TATTGCGACC GCTTATTGTG
ATGGATAAAC GCGATATTAT TGATATCTCC CGCAAAATTG GCGCAGAAGA GTTCTCTGCT
GCTGTGCCTG AGTATTGCGG TGTTATTTCG GTAAAACCCT CTGCAAAAGT GAATCGTGCC
AAGCTTGAGG CGGAAGAAGA AAAGTTTGAT TTTTCTATCC TCGAACACGC GCTAGAAAAC
GCGGTAGTGC AATCTATCGA TGAGGTGATG GATGATGCGC AAGAGCTTGC CGAGGTTGAA
TTGGTGTCGG AATTGCCCGT CAGTGCCAAA GTTATTGATA TTCGCCATCA CACCGAGCAA
GAACTGCGAC CCCTTACTGT TGAAGGGCGC GAAGTGTTGG AAATACCTTT TTACCAATTA
AGCACAGCTT ATGCAGAGTT GGATAAAGCC GTTAACTATT ATTTATTTTG CGATAAGGGG
GTAATGAGCG GGCTGCATGC TCGGCATTTG CTAGATGCTG GCTATACTAA TGTAGGTGTT
TATCGGCCTT AG
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| Protein sequence | MRFVVRLFPE ISIKSAPVRK RWTKMLTDNL RLMAKRIHPT ARVNKEWDRI EVTAKVDDPV
VEGQLIDMLA RTPGIANFSH VQTHPFESLH DIYELVQASW GDQLKGKTFC VRVKRTGNHD
FTSTEVERYV GGGLNQNNPT GGVKLKDPDV SIGLEVKDDQ VYLVTKKYQG LGGFPMGTQE
SVLSLISGGY DSTVASFQMI KRGLRTHYCF FNLGGREHEL AVKEIAFFLW NRFGSTHRVR
FISVPFEGVV GEILQKVGPS NMGVVLKRMM LRAGERIAER GGIEAMVTGE AVAQVSSQTI
PNLSVIDSVT DMMVLRPLIV MDKRDIIDIS RKIGAEEFSA AVPEYCGVIS VKPSAKVNRA
KLEAEEEKFD FSILEHALEN AVVQSIDEVM DDAQELAEVE LVSELPVSAK VIDIRHHTEQ
ELRPLTVEGR EVLEIPFYQL STAYAELDKA VNYYLFCDKG VMSGLHARHL LDAGYTNVGV
YRP
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