| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0423 |
|---|
| Symbol | |
|---|
| ID | 3967085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 521056 |
|---|
| End bp | 521820 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637919486 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_525899 |
|---|
| Protein GI | 90020072 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAA AAAACCACAG AACAAACGTT GTAATTACTA TGGCTGGGCA GGGATCTCGT
TTTTACAAGG CGGGCTATAC GCAACCTAAA TACGCTATTG AAGCCCATGG TCGTACACTG
TTTGAGTGGT CGATGCTCTC CCTAAAAAAT ATTATTAACG CTGATAGCCG CTTAATATTT
GTGTGCTTAC AAGAGCATAA CGCTACGACG TTTGTAAAAG AGCGTTGCTT AGCGCTTGGC
TATAGCGATG TGCATATTGT AGAAATACAA GCCTTAACCG ATGGCCAGGC AACAAGCGCT
TTGCTGTCGC ACCATTTATG GATTCCAAAT ACCCCTTTGT TAATTTACAA CATAGATACG
TATGTGCAGC CAAGCGCGTT AACGCTTAGC GATATGAAAC CTGGCTCACA AGGGTGGGTG
CCCTGTTTTC AAGTGCCGGG CGACCACTGG AGTTTTGTGA AGTTGGGCGA AGATGGATGG
GCAACCGATT GCGCCGAAAA AACACGTATA TCCGATTATG CATCTATCGG TTTGTATTGG
TTTGCCTGTG GCGAAATTTA TGCCGATGCA TACCAAAAGT TTTTTAGTGA TCCAGCCAAT
TTGGTAAACG GTGAACGTTA CATTGCACCG CTATATAAGC AGCTTTTAGC AGATGGTAAA
AAAGTTTCTA TTGCTGATTT GCCCGTAACC AGCGTGCATG TAATTGGTAC GCCCGCAGAA
CTAGATGTAT TTAAAAATAA ACCATTAGAC CAAATTGGCT TATAA
|
|---|
| Protein sequence | MLEKNHRTNV VITMAGQGSR FYKAGYTQPK YAIEAHGRTL FEWSMLSLKN IINADSRLIF
VCLQEHNATT FVKERCLALG YSDVHIVEIQ ALTDGQATSA LLSHHLWIPN TPLLIYNIDT
YVQPSALTLS DMKPGSQGWV PCFQVPGDHW SFVKLGEDGW ATDCAEKTRI SDYASIGLYW
FACGEIYADA YQKFFSDPAN LVNGERYIAP LYKQLLADGK KVSIADLPVT SVHVIGTPAE
LDVFKNKPLD QIGL
|
|---|
| |