| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0256 |
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| Symbol | |
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| ID | 3966022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 320556 |
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| End bp | 322238 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919316 |
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| Product | hypothetical protein |
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| Protein accession | YP_525732 |
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| Protein GI | 90019905 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.17253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.370888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAC TATTATTCAA ACGTAAATTA CTTTACGCTA GCCTATTAGC CGCGGCGAGC
GTTGCTGCTG CGCCGGTTCA AGCAGAGAAA GCGCAGCCAT CTAACTGCCA GCCTATAAAA
AATACAGAAG CCATTGCAGA GGGTACCCGT GTTAATAAAA AAGCACTTGG TAAATGGAAG
AATAAAAAAA TACATAAAAT AAACATAACC ATTAACAATA TTTTTGATGA GAGTGACCCA
GCCGAAAACA AATGGATTTA CCGTTTGGCC AATAGAATAC AGGTGAATAC ACGTGAAAAT
ACTATTCGCT CGCAATTGCT CTTTAAAGAG GGTGACGAGG TAGATCCAGA AAGAATAGAA
GAAAGCTTAA GGCGTTTATA CAAAAAAGAA TATTTACTGG ATGTAAAACT CGAGCTGGCC
GAGCAGTGTG GCGACTCGGT AACGCTTGAT TTAATTGTAC GTGATGCGTG GACAATAGAG
CCGAGAATAT CAGCTGGGCA TGAAGGCGGA GAGAGCAGCA GTGAATTCGG CCTGCGTGAT
GGAAACTTTC TGGGCAGCGG CGCCGAGCTG GAGCTTATTT ATAAAACTGA TGCCGAGCGC
AGTCAGGTGG ATTATAAATA TCGCAGTGAG AACTTTCTAA ATACGCGTTG GTTAGCAGAG
TTCTACCACG CAGACCTATC CGACGGCGAA AATAATCGCG TAATTCTAGA GAAACCCTAC
TATTCCAATA ACACCCGTTG GGCGTATGGG TTTGAAGTAG AAACACTTAC GCAAGTAGAT
AAGATAAGAA TGGGGGATTC GCTACTTAAC GCATATAGCC ATGTAACAGA AAGCCAAAAT
GCATACCTAG GACGTGCTTT AGCCATAAAT TCGAAGCGAA CCTATCGCCT AAATGTGGGT
GTAACTGCTG TGGACCATGC ATTTTCAAAT GTAGAGCAAA CCCAACAATT ACCAGATTCC
GAGCAACAAT TTTACCACTG GCTTGAAGTG CAGCGTCAGA CCAATGAATT TAAAACCTAT
ACTAATTTAA ACTATATTAA GCGCGCTGAA GATATTGCCA TAGGGCAAGA GTTTTCTGTG
CGTGTAGGGC AAGGTGAATG GGCAGAAACC GACTCGATGA CGCGCTTAAT TGCGCAGTAC
AGCAATGCGC TAGCCCTGCA GGGGAATCAC CTCTTTAAGT TTGATACTTA TACCGATTTG
GTTTACACCA ATGAAGATCA ATCCCTTGCA AATTCAATTT GGGGGCTAAG CGGTAAATAC
CATTATTATG TGGACGGCAA AAACCGTTGG CAAATACGCG CCTCCTGGGA CAGAGGTAAT
AACTTACCCG AATACCGCGA GCTAACATTG GGCGAAGAGG TAGGCATGCG AGGTTATCCA
CTGTCTTATC AGCGGGGCGA TAATCGCTAT ATTGTAAATA TAGAGCGCAG GTTTTATTCA
GATATTCACT GGTTTAATTT AATACGTGTA GGGGCAGTGG CATTTGTGGA TGCAGGGCGA
GCTTGGCAAA CAGGCAGTGG CGAGCAAGCC GACCACTTAG CCAGTGCGGG GTTAGGGTTG
CGCTTGCATT CCAGTAAATC CGGTAACCCC GCAGTTATAC ATATAAACTT GAGTGCCCCG
CTAGTAAAAG ATGAACAACT CGATGACTAC TTAGTTTCAG TTGCAGTTGG CACCGAGTTC
TAA
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| Protein sequence | MKKLLFKRKL LYASLLAAAS VAAAPVQAEK AQPSNCQPIK NTEAIAEGTR VNKKALGKWK
NKKIHKINIT INNIFDESDP AENKWIYRLA NRIQVNTREN TIRSQLLFKE GDEVDPERIE
ESLRRLYKKE YLLDVKLELA EQCGDSVTLD LIVRDAWTIE PRISAGHEGG ESSSEFGLRD
GNFLGSGAEL ELIYKTDAER SQVDYKYRSE NFLNTRWLAE FYHADLSDGE NNRVILEKPY
YSNNTRWAYG FEVETLTQVD KIRMGDSLLN AYSHVTESQN AYLGRALAIN SKRTYRLNVG
VTAVDHAFSN VEQTQQLPDS EQQFYHWLEV QRQTNEFKTY TNLNYIKRAE DIAIGQEFSV
RVGQGEWAET DSMTRLIAQY SNALALQGNH LFKFDTYTDL VYTNEDQSLA NSIWGLSGKY
HYYVDGKNRW QIRASWDRGN NLPEYRELTL GEEVGMRGYP LSYQRGDNRY IVNIERRFYS
DIHWFNLIRV GAVAFVDAGR AWQTGSGEQA DHLASAGLGL RLHSSKSGNP AVIHINLSAP
LVKDEQLDDY LVSVAVGTEF
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