Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0254 |
Symbol | |
ID | 3966020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 317545 |
End bp | 318120 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637919314 |
Product | hypothetical protein |
Protein accession | YP_525730 |
Protein GI | 90019903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.941246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.425073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACT TTATTAAACC TTTAGCAATT TCCATTACTT CTCTAGGCTT AGTTTTTACC GGCGCTTCTT ATGCTAACGA CGTAAACGAA GGCATCTCTC CTTATATTGG TGGCTCTTAC GGACGAATAG ATGTTAACAA CGATGACTTT GGTGATGACG ACGATGCTGC TTACTCAATT TATAGCGGCG TAAAGATCGG GCCTATTTTT GCGGCTCAAC TTGGCTATGT AGATTTTGGT GGAACTAACA ACGACTTTTT CTCGACCAAT ACAACTGGCA TAGAGCTTTC TGGCTTAGCG TATGTGCTAA ACACCGAAAT GGTGGATGTA TATTTGCGCG GCGGCCTATT GTTTTGGGAT GCAGAACTAA ACAGCGATTC GTTTAATACC GATAACGACG GCAACGAGCT CTTCTGGGGT GTAGGGTCGG ATATCAACCT TACCGAGAAC CTTTCATTGC GCCTAGAGTA TGCCCGCTAT AATGTGGAGT ACGAAGATGA CGAGTTTGGA CCATTGGCAG ACGGTACCGA GTACGACCTT AACCACTTGA ATGCCGGTAT TAATTTCTCC TTCTAA
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Protein sequence | MKNFIKPLAI SITSLGLVFT GASYANDVNE GISPYIGGSY GRIDVNNDDF GDDDDAAYSI YSGVKIGPIF AAQLGYVDFG GTNNDFFSTN TTGIELSGLA YVLNTEMVDV YLRGGLLFWD AELNSDSFNT DNDGNELFWG VGSDINLTEN LSLRLEYARY NVEYEDDEFG PLADGTEYDL NHLNAGINFS F
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