Gene Sde_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0254 
Symbol 
ID3966020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp317545 
End bp318120 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content44% 
IMG OID637919314 
Producthypothetical protein 
Protein accessionYP_525730 
Protein GI90019903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.941246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.425073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TTATTAAACC TTTAGCAATT TCCATTACTT CTCTAGGCTT AGTTTTTACC 
GGCGCTTCTT ATGCTAACGA CGTAAACGAA GGCATCTCTC CTTATATTGG TGGCTCTTAC
GGACGAATAG ATGTTAACAA CGATGACTTT GGTGATGACG ACGATGCTGC TTACTCAATT
TATAGCGGCG TAAAGATCGG GCCTATTTTT GCGGCTCAAC TTGGCTATGT AGATTTTGGT
GGAACTAACA ACGACTTTTT CTCGACCAAT ACAACTGGCA TAGAGCTTTC TGGCTTAGCG
TATGTGCTAA ACACCGAAAT GGTGGATGTA TATTTGCGCG GCGGCCTATT GTTTTGGGAT
GCAGAACTAA ACAGCGATTC GTTTAATACC GATAACGACG GCAACGAGCT CTTCTGGGGT
GTAGGGTCGG ATATCAACCT TACCGAGAAC CTTTCATTGC GCCTAGAGTA TGCCCGCTAT
AATGTGGAGT ACGAAGATGA CGAGTTTGGA CCATTGGCAG ACGGTACCGA GTACGACCTT
AACCACTTGA ATGCCGGTAT TAATTTCTCC TTCTAA
 
Protein sequence
MKNFIKPLAI SITSLGLVFT GASYANDVNE GISPYIGGSY GRIDVNNDDF GDDDDAAYSI 
YSGVKIGPIF AAQLGYVDFG GTNNDFFSTN TTGIELSGLA YVLNTEMVDV YLRGGLLFWD
AELNSDSFNT DNDGNELFWG VGSDINLTEN LSLRLEYARY NVEYEDDEFG PLADGTEYDL
NHLNAGINFS F