| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0229 |
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| Symbol | |
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| ID | 3967080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 290040 |
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| End bp | 290801 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637919289 |
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| Product | histidine kinase |
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| Protein accession | YP_525705 |
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| Protein GI | 90019878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.990532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAGA CCTCACATAA AAAAGTACAA AGCATTTTAT ACCTAAGCGG TGTAACCAAA
TCGTTTGATG GCTTTAAGGC AATTAATAAT TTGTCTTTGG ATATTGCCCC CGGTGAGTTG
CGAGCCATAA TTGGCCCCAA CGGCGCGGGT AAAAGTACCA TGATGGATAT TATTACCGGC
AAAACTAAAC CCGATGAGGG CGATGTTAAA TTCAAAGACA CCATTGATTT AACCCGTCAC
GACGAAACCG ATATTGCCAA CATGGGTATT GGTCGCAAGT TTCAAAAACC CACGGTAATA
GAAAGCTTAA CCGTGTGGGA TAACATGGAA CTTGCCTTGG CCGGTAATCG CGGTATTTTT
CAAACCTTAT TTTGGAAACT TAGCGACGAC AAGAAATTAC GTATTGAAGA AATTATTAAG
CAAATTGGCT TAGCAGAAAA AACCGACGAC CTTGCACAAA ACTTGTCGCA CGGGCAAAAG
CAATGGTTAG AAATTGGCAT GTTGTTAATT CAAGAGCCGG AAGTGCTACT GGTGGATGAA
CCCGCCGGCG GCATGACCGA CTACGAAACA ATGGAAACTG CCAAACTGCT AAAAGAAATT
AGCCAAGAGC ACTCGGTAAT AGTGGTAGAG CACGATATGG ATTTTGTGCG TGCACTTGAT
TGCAAGGTTA CGGTACTGCA CGAAGGTAGC GTACTGGCCG AGGGGACACT CGATAAAGTG
TCTAGTGATA AACGCGTTGT GGAGGTATAC CTGGGCCGCT AG
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| Protein sequence | MLETSHKKVQ SILYLSGVTK SFDGFKAINN LSLDIAPGEL RAIIGPNGAG KSTMMDIITG
KTKPDEGDVK FKDTIDLTRH DETDIANMGI GRKFQKPTVI ESLTVWDNME LALAGNRGIF
QTLFWKLSDD KKLRIEEIIK QIGLAEKTDD LAQNLSHGQK QWLEIGMLLI QEPEVLLVDE
PAGGMTDYET METAKLLKEI SQEHSVIVVE HDMDFVRALD CKVTVLHEGS VLAEGTLDKV
SSDKRVVEVY LGR
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