Gene Sde_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0213 
Symbol 
ID3967064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp272962 
End bp273684 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID637919273 
Producthypothetical protein 
Protein accessionYP_525689 
Protein GI90019862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.632308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA TGCCAGTTCA CAAGCAGATG ATCGAAAATG TAGCCAATGC GCTGGGAGAT 
GAGTTTCGAC AACAAATGAC ATTTGTTGGT GGATGCACCA CTGGACTTTT ACTTACAGAT
GAATACACAA AAGAGCAAGT ACGACATACT GACGACGTCG ACCTAATTGT TCATACAATG
GGTTATGTAG AATTCCATCA ATTACAGGAA AAACTCAAAA CACAGGGGTT CACCATGCCC
AACCCCGCCC CAGGAGAGGC GCCGCCAATT TGTGCAATGC AACTAGGCGA CCTTCGAGTG
GATTTCATGC CTGATGATGA AGGCGTCCTG GGCTTTAGCA ATTGCTGGTA CAAAGATGCA
ATGCAAACTG CAGAAAATTA TCGCCTCAAT CCTGATCTCA CCATCAAATT AGTTACGCCG
GTTTACTTTT TAGCTACCAA GCTCGAAGCA TACAAGGGGC GAGGTAACAA CGACGCGTTG
AGTAGTAGAG ACATCGAGGA TATTCTCAAT CTAGTCGACG GGCGAGAAGA ACTTCTAGGA
GAAGTAAAAA TGGCCCCACC AGAACTGCAA ACCTATATAT CGAAAGAATT AACCCCTCTT
TTAAAGGATA TTAATTTTGA GTATGCAGTT CAAAGTCAAG CGAAAGGGAA TGCTGAGAGA
GAAGATCTAA TCTTCGAACG ACTAGATACT CTATCTTCAT ACGCTTCAGA CAGCCTAAAG
TGA
 
Protein sequence
MSAMPVHKQM IENVANALGD EFRQQMTFVG GCTTGLLLTD EYTKEQVRHT DDVDLIVHTM 
GYVEFHQLQE KLKTQGFTMP NPAPGEAPPI CAMQLGDLRV DFMPDDEGVL GFSNCWYKDA
MQTAENYRLN PDLTIKLVTP VYFLATKLEA YKGRGNNDAL SSRDIEDILN LVDGREELLG
EVKMAPPELQ TYISKELTPL LKDINFEYAV QSQAKGNAER EDLIFERLDT LSSYASDSLK